Gene Clim_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1788 
SymbolpyrB 
ID6354617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1965516 
End bp1966442 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content55% 
IMG OID642669391 
Productaspartate carbamoyltransferase catalytic subunit 
Protein accessionYP_001943806 
Protein GI189347277 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0540] Aspartate carbamoyltransferase, catalytic chain 
TIGRFAM ID[TIGR00670] aspartate carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.40723e-10 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAACC TTACCGGATT ATGCAACCTT CCGGCCGGTG ACATCCATAC GCTGCTCGAC 
CTGGCAGCTG TATTCAAAAA GAGACTGGTT ACCCCCGATC CATCATTTTC CGTCACGCTG
CAAAACAAAC GCATCGCACT GGTTTTTTTC GAGAACTCCA CTCGTACCCG TTTCTCTTTT
GATATAGCCG CCCGCCATCT CGGCGGAAGC ACCCTGAGCT TCAGTGCATC CGGAAGCAGT
GTCAGCAAAG GAGAATCTCT CGGCGACACC ATCAGAAACC TTGAAGCCAT GCAGGTTGAC
GCCTTCGTAC TGAGGCATGC ATCGTCAGGA GCCGCAGATT TCATCGCCGG CATTACCGCA
AAAACCGTCA TCAACGCAGG CGACGGCTCT CACGAACACC CGACGCAGGC ACTGCTCGAC
ATTTTCACGC TTCGCGAACA CTTCGGTGCG GTAAAGGGGC TCAACATCGT CATTCTCGGC
GATGTACTGC ACAGCCGGGT AGCCCGCTCA AATATTTTCG GTCTGAAAAC TCTTGGCGCC
AATGTCGCTG TCTGCGGACC GGCCACCCTG CTTTTTTCCG ATACCTCGCA CCTCGGAGTC
AGCATATTCA CCGATCTCGA CAAGGCCATC GAATGGGCGG ATGCCGCTCT TGTACTCCGG
CTGCAGCTTG AACGGGCAAC CGGAGGGTAC CTCCCATCGC TTGAAGAGTA CTCCACGCAC
TTCGGGCTCA ACGACGAACG CCTCGAAAGA GTACGCAAAC ATCTTCTGGT TCTCCATCCG
GGTCCCATCA ACAGGGAGAT CGAAATATCC AACAACGTAG CCGACCGGAT ACAACCTCCC
GGGTACTCGA AAAGCATGCT GCTTGAACAG GTCTCGAACG GTGTCGCCGT TCGCATGGCT
GTCCTGCAGA CGCTGCTTGC CGGATAA
 
Protein sequence
MKNLTGLCNL PAGDIHTLLD LAAVFKKRLV TPDPSFSVTL QNKRIALVFF ENSTRTRFSF 
DIAARHLGGS TLSFSASGSS VSKGESLGDT IRNLEAMQVD AFVLRHASSG AADFIAGITA
KTVINAGDGS HEHPTQALLD IFTLREHFGA VKGLNIVILG DVLHSRVARS NIFGLKTLGA
NVAVCGPATL LFSDTSHLGV SIFTDLDKAI EWADAALVLR LQLERATGGY LPSLEEYSTH
FGLNDERLER VRKHLLVLHP GPINREIEIS NNVADRIQPP GYSKSMLLEQ VSNGVAVRMA
VLQTLLAG