Gene Clim_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1787 
Symbol 
ID6354616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1965038 
End bp1965388 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content58% 
IMG OID642669390 
Producthydrogenase nickel insertion protein HypA 
Protein accessionYP_001943805 
Protein GI189347276 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.97266e-12 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGAAA TGTCGATAGC CCTCTCCATT GTCGATGCTG TCGATGCGCA AGCCCGTGTC 
GAGGGCGCGG GGAGAATTTC GAGGGTGGAA CTCGTTATCG GTCGTCTGGC CGGCATCGAG
CCTGAATCGC TGCGGTTCTG TTTTCCTGCC GCGGCGACGG GTACTCTTGC CGAGGGTGCC
GAGCTGGATA TCGAGGAGAT TGCCGCCGTT GCCGTTTGCG GAGCGTGCGG ATTCCGGTTT
TCCGTCACGT TTCCGGTGGC GGAGTGTCCT GAGTGCAGGT CGCTGAGGAT AAGTGTGGTT
TCGGGAGAGG AGTTCGTTAT TCGGTCAATC ACTATTGAAG AGGGAGATTA A
 
Protein sequence
MHEMSIALSI VDAVDAQARV EGAGRISRVE LVIGRLAGIE PESLRFCFPA AATGTLAEGA 
ELDIEEIAAV AVCGACGFRF SVTFPVAECP ECRSLRISVV SGEEFVIRSI TIEEGD