| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1786 |
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| Symbol | |
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| ID | 6354615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1964224 |
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| End bp | 1965033 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642669389 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_001943804 |
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| Protein GI | 189347275 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000000796055 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCGATA CATGCGGATG CGGGTCGGAT GCTGATGCCG TAATACGCAG ACCCGGTCAG
GGGAGCGGAC ATCATCATGA TCATGACGGG CATGATCATC ACCACGGGCA TGATCACGAT
CGCGGACATG ACCACGATCA CCATCATGAG CGCAGGGCGA GAAAGATCGG AATGGAGCAG
GATGTGCTTC AGCAGAACAA CCTTCTTGCC GAAAGAAATC GCGGCTATTT TGAGGCAAAA
AATATTGTAG CCCTGAATTT TCTGAGTTCG CCGGGTTCAG GGAAGACTTC CCTGCTCGAG
AAAACCATTC CGCAGTGCAA GGGGAAGTTT TCTGTGTCGG TTATCGAAGG AGACCAGCAG
ACCACCAACG ATGCCGATCG CATCCATGCG CTCGGCGTGC CGGTTGTTCA GGTCAATACG
GGCACCGGCT GCCATCTCGA TGCCCTCATG ATAAACCGTG CTCTGAAAGA GCTCGCTCCC
GAGGCGAACT CGCTGCTTTG TATCGAGAAT GTAGGCAATC TTGTCTGTCC GGCCCTTTTT
GATCTGGGAG AGGCGATGAA AGTTGTCGTT ATCAGCGTTA CGGAAGGCGA CGACAAGCCG
CTGAAGTATC CATATATGTT TCATGAGGCG GATGTCTGCA TTCTCAACAA AATCGATCTG
CTCCCTTATG TGGAGTTTGA TGCCGCAGTG TGCCGGGAAA ACGCCATGCG GGTAAGCCAC
GATATCGAGT GGTTCGATCT GTCTGTAAGA ACCGGTGAGG GCCTGGATGC CTGGCTGGCC
TGGCTTGAAC GAAAAATGGC GAAGCGCTGA
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| Protein sequence | MCDTCGCGSD ADAVIRRPGQ GSGHHHDHDG HDHHHGHDHD RGHDHDHHHE RRARKIGMEQ
DVLQQNNLLA ERNRGYFEAK NIVALNFLSS PGSGKTSLLE KTIPQCKGKF SVSVIEGDQQ
TTNDADRIHA LGVPVVQVNT GTGCHLDALM INRALKELAP EANSLLCIEN VGNLVCPALF
DLGEAMKVVV ISVTEGDDKP LKYPYMFHEA DVCILNKIDL LPYVEFDAAV CRENAMRVSH
DIEWFDLSVR TGEGLDAWLA WLERKMAKR
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