Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1771 |
Symbol | |
ID | 6354600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1946440 |
End bp | 1947933 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642669374 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_001943789 |
Protein GI | 189347260 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000657758 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTGGAG TTTTCGGCAT TTTCAACTCA AAAACTCCAG CAGAAGATAC CTTTTACGGG TTATACTCTC TGCAGCACAG GGGACAGGAA GCCGCCGGAA TTGTTGTTGC TGATTACAAC AAGGCAAAAA AGAAAACCCT GTTCAAGCAG CACAAAGGCA TGGGACTGGT TTCGGAGGTT TTCAGGGACG AAGCCATTTT TGAAACCCTC GGCGGCTATG CGGCAATAGG CCATAACCGC TACTCCACAA CCGGCTCATC GAAATCCACA AGCAATATCC AGCCGTTCTC GCTCACCTAC CGTTCCGGCA GTCTTGCAAT AGCTCATAAC GGCAACCTTA CCAATTCTCG GGCGCTGCGC CGCGAGCTCA CCGAACTCGG CGTCATATTC CAGGCTTCGT CCGATACGGA AATCATTCCT CATCTGGCGG CAAGAAGCCG CGAAAAAGAA CCGCTGCACC AGATATACGA TGCCCTGCGT CAGGTTCAGG GAGCTTATTC CATGGTGATA CTGGCCAATA ACCAGATGAT CGCGGCAAGA GATCCTTTCG GATTCAGGCC GCTGGCTCTC GGTAAAAAAA TCGATCCGCT TACCGGCGAA CTCTCCTACA TCGTAGCCAG CGAAACCTGC GCATTCGACA TCATCCAGGC AGAATATATC CGCGATATCG AACCGGGAGA GATTCTTCTG ATCGATCACC TCGCCGTTAC CAACGAAAAC CCGACATCGA TCTACCTGCC GCCATCGAAA CGCAAGGCCC GCTGCATCTT TGAATATGTA TATTTCGCCC GCCCCGACAG TTTTATCTTC AAGCATTCGG TCGATAAAGT CCGGAGAAAT CTTGGTAAAA ACCTTGCGCG CGAATCAACC ATAGAGCAGC AGCCGGAAAA GAAGGAGATA ACGGTGGTAA GCGTTCCCGA CTCGTCCAAT ACCGCCGCGC TCGGTTTTGT GAGGGAGAGC AATAAACTGA ACAAGCCGGC AAGGTTCGAG CACGGGCTTA TCAGAAACCA CTATGTTGGC AGAACGTTCA TTCAGCCGGG CATTCACAGC AGAGACATCA AGGTGCGATC TAAATACAAT ATCGTCAGAG GAGTGCTGAC CGAGCGGCCG ATTATCCTGA TCGACGACTC CATTGTGCGC GGCACCACGG CGAAAATGCT GATCAAGCTG ATTCGTGAAG CCGACCCTGA AGCCATACAT CTGCATATCA GCTCGCCTCC CATCACCAAC CCCTGTTTCT ACGGCATGGA TTTCCCCACC AAACGCCAGC TCCTCACCCA TATGTTCGAA ACAACCGGCA ACGAAGAGGA GGAGATTGAA AAAATCCGTG AGTATATCGG CGTCGATTCC CTGAAGTATC TCTCCATGCA GGGTCTTCTC AACAGCGTGC CAACCTTCGA AAACGAAACC TGCAGTTACT GTACTGCCTG CTTCAGCGGA GATTACCCCA TTCAGGTCAA CGAGGCGACA ACCGACAAAG AGGAAAACGA CTGA
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Protein sequence | MCGVFGIFNS KTPAEDTFYG LYSLQHRGQE AAGIVVADYN KAKKKTLFKQ HKGMGLVSEV FRDEAIFETL GGYAAIGHNR YSTTGSSKST SNIQPFSLTY RSGSLAIAHN GNLTNSRALR RELTELGVIF QASSDTEIIP HLAARSREKE PLHQIYDALR QVQGAYSMVI LANNQMIAAR DPFGFRPLAL GKKIDPLTGE LSYIVASETC AFDIIQAEYI RDIEPGEILL IDHLAVTNEN PTSIYLPPSK RKARCIFEYV YFARPDSFIF KHSVDKVRRN LGKNLAREST IEQQPEKKEI TVVSVPDSSN TAALGFVRES NKLNKPARFE HGLIRNHYVG RTFIQPGIHS RDIKVRSKYN IVRGVLTERP IILIDDSIVR GTTAKMLIKL IREADPEAIH LHISSPPITN PCFYGMDFPT KRQLLTHMFE TTGNEEEEIE KIREYIGVDS LKYLSMQGLL NSVPTFENET CSYCTACFSG DYPIQVNEAT TDKEEND
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