Gene Clim_1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1771 
Symbol 
ID6354600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1946440 
End bp1947933 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content52% 
IMG OID642669374 
Productamidophosphoribosyltransferase 
Protein accessionYP_001943789 
Protein GI189347260 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase 
TIGRFAM ID[TIGR01134] amidophosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.57758e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGGAG TTTTCGGCAT TTTCAACTCA AAAACTCCAG CAGAAGATAC CTTTTACGGG 
TTATACTCTC TGCAGCACAG GGGACAGGAA GCCGCCGGAA TTGTTGTTGC TGATTACAAC
AAGGCAAAAA AGAAAACCCT GTTCAAGCAG CACAAAGGCA TGGGACTGGT TTCGGAGGTT
TTCAGGGACG AAGCCATTTT TGAAACCCTC GGCGGCTATG CGGCAATAGG CCATAACCGC
TACTCCACAA CCGGCTCATC GAAATCCACA AGCAATATCC AGCCGTTCTC GCTCACCTAC
CGTTCCGGCA GTCTTGCAAT AGCTCATAAC GGCAACCTTA CCAATTCTCG GGCGCTGCGC
CGCGAGCTCA CCGAACTCGG CGTCATATTC CAGGCTTCGT CCGATACGGA AATCATTCCT
CATCTGGCGG CAAGAAGCCG CGAAAAAGAA CCGCTGCACC AGATATACGA TGCCCTGCGT
CAGGTTCAGG GAGCTTATTC CATGGTGATA CTGGCCAATA ACCAGATGAT CGCGGCAAGA
GATCCTTTCG GATTCAGGCC GCTGGCTCTC GGTAAAAAAA TCGATCCGCT TACCGGCGAA
CTCTCCTACA TCGTAGCCAG CGAAACCTGC GCATTCGACA TCATCCAGGC AGAATATATC
CGCGATATCG AACCGGGAGA GATTCTTCTG ATCGATCACC TCGCCGTTAC CAACGAAAAC
CCGACATCGA TCTACCTGCC GCCATCGAAA CGCAAGGCCC GCTGCATCTT TGAATATGTA
TATTTCGCCC GCCCCGACAG TTTTATCTTC AAGCATTCGG TCGATAAAGT CCGGAGAAAT
CTTGGTAAAA ACCTTGCGCG CGAATCAACC ATAGAGCAGC AGCCGGAAAA GAAGGAGATA
ACGGTGGTAA GCGTTCCCGA CTCGTCCAAT ACCGCCGCGC TCGGTTTTGT GAGGGAGAGC
AATAAACTGA ACAAGCCGGC AAGGTTCGAG CACGGGCTTA TCAGAAACCA CTATGTTGGC
AGAACGTTCA TTCAGCCGGG CATTCACAGC AGAGACATCA AGGTGCGATC TAAATACAAT
ATCGTCAGAG GAGTGCTGAC CGAGCGGCCG ATTATCCTGA TCGACGACTC CATTGTGCGC
GGCACCACGG CGAAAATGCT GATCAAGCTG ATTCGTGAAG CCGACCCTGA AGCCATACAT
CTGCATATCA GCTCGCCTCC CATCACCAAC CCCTGTTTCT ACGGCATGGA TTTCCCCACC
AAACGCCAGC TCCTCACCCA TATGTTCGAA ACAACCGGCA ACGAAGAGGA GGAGATTGAA
AAAATCCGTG AGTATATCGG CGTCGATTCC CTGAAGTATC TCTCCATGCA GGGTCTTCTC
AACAGCGTGC CAACCTTCGA AAACGAAACC TGCAGTTACT GTACTGCCTG CTTCAGCGGA
GATTACCCCA TTCAGGTCAA CGAGGCGACA ACCGACAAAG AGGAAAACGA CTGA
 
Protein sequence
MCGVFGIFNS KTPAEDTFYG LYSLQHRGQE AAGIVVADYN KAKKKTLFKQ HKGMGLVSEV 
FRDEAIFETL GGYAAIGHNR YSTTGSSKST SNIQPFSLTY RSGSLAIAHN GNLTNSRALR
RELTELGVIF QASSDTEIIP HLAARSREKE PLHQIYDALR QVQGAYSMVI LANNQMIAAR
DPFGFRPLAL GKKIDPLTGE LSYIVASETC AFDIIQAEYI RDIEPGEILL IDHLAVTNEN
PTSIYLPPSK RKARCIFEYV YFARPDSFIF KHSVDKVRRN LGKNLAREST IEQQPEKKEI
TVVSVPDSSN TAALGFVRES NKLNKPARFE HGLIRNHYVG RTFIQPGIHS RDIKVRSKYN
IVRGVLTERP IILIDDSIVR GTTAKMLIKL IREADPEAIH LHISSPPITN PCFYGMDFPT
KRQLLTHMFE TTGNEEEEIE KIREYIGVDS LKYLSMQGLL NSVPTFENET CSYCTACFSG
DYPIQVNEAT TDKEEND