Gene Clim_1766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1766 
Symbol 
ID6354594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1941598 
End bp1942260 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content54% 
IMG OID642669368 
ProductRadical SAM domain protein 
Protein accessionYP_001943784 
Protein GI189347255 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.988544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATCT CCATCTCTGA AATCTTCCAC TCCATCCAGG GAGAGTCGTC ATTCGCCGGA 
TGGCCCTGCG CCTTCGTCCG GCTTGCCGGA TGCGGCCACG GCTGCCGGTA TTGCGACACA 
ACCTATGCTG AAAAACCCGG CACAGAGATG GAGACCGACG AAATCTTCGA AAAAATCGAC 
GAAATCGGAG CGCAGCTGGT GGAAATAACC GGAGGAGAAC CGCTGCTGCA GAAAGAGGTC 
TATCCGCTCA TGGAAAGACT CTGCGACCGG AAAGAAAAAG TGCTGCTCGA AACCGGAGGA 
TTCCTTTCCG TAGCAAAGGT GGATCAGCGC GTGCACAAAA TTATCGACCT GAAAGCGCCA 
TCTTCCGGCG TGTGCAACAA GAACAATCCG CAAAACATCG AGCTGGCCAT GCGAAGCGGA 
AAGGCAGAAA TCAGCTCGTT CGAATTCAAA ATTGTGGTCG CCGATCGCGA GGACTACCTC 
TGGGCAAGAA CGATGCTTAC AGATACCGGT CTTGCCGAAG CCTGCACGGT CATGTTGGGG 
GTGGTGTTCG GTAAACTGGA ACCCGAACGC CTGGCGCAGT GGATTCTCGA AGACCGGATC 
AGGGTTCGCA TGCAGCTCCA GTTGCATAAG TATATTTGGC CACCGGAAAT GAGAGGGGTA 
TAA
 
Protein sequence
MTISISEIFH SIQGESSFAG WPCAFVRLAG CGHGCRYCDT TYAEKPGTEM ETDEIFEKID 
EIGAQLVEIT GGEPLLQKEV YPLMERLCDR KEKVLLETGG FLSVAKVDQR VHKIIDLKAP 
SSGVCNKNNP QNIELAMRSG KAEISSFEFK IVVADREDYL WARTMLTDTG LAEACTVMLG 
VVFGKLEPER LAQWILEDRI RVRMQLQLHK YIWPPEMRGV