Gene Clim_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1718 
Symbol 
ID6355796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp1889893 
End bp1890801 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content51% 
IMG OID642669322 
Product1,4-dihydroxy-2-naphthoate octaprenyltransferase 
Protein accessionYP_001943738 
Protein GI189347209 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTG ATCCTTCATC AGTGAACGCT TCGAGGGTTA CCGCTTTTCA GGCATGGATG 
CTTGCCATAA GGCCGAAAAC GCTTCCTGCC GGTGCGGTTC CGGTTATTCT TGGTTCCGCC 
ATAGCTGCTG CCGACGGCAG ATTCTCTTTT CTGCCGGCTT TTGTCGCGCT TGTCTGTGCT 
CTCGGTATTC AGGTCGCGAC GAATTTCATC AATGAAATCT ACGATTTCCG AAAGGGCGCA 
GATACTGCGG AAAGGCTTGG TCCCACAAGA ACCGTCGCTG CCGGTATAAT CAGTGAAAAG 
AAGATGATAA CAGTTTCGAT AACCCTCCTT TCGCTTGTTT TTCTGCTCGG CATGTACCTT 
GTGTATACTG CCGGCTGGCC GATTCTTCTG ATCGGTCTTC TGTCTATGCT TTTTGCGTGG 
GCCTATACGG GCGGCCCATA TCCCATTGCC TATTCAGGTC TCGGCGATCT CTTCGTTTTT 
GTGTTTTTCG GCCTGGTTGC TGTTGGTGGG ACCTATTATG TGCAGGCGCT TGATCTTTCC 
TTTCCTGTTT TCCTCGCGGC AGCGGCTCCG GGAGCTTTTT CCGTGAATAT TCTGCTGGTC 
AACAATATCC GAGATATTGC AACCGACAGA ACGGTCGGCA AGATGACACT TCCTGCTCGC 
ATCGGCGGGT CCGGTGCAAG GTCACTCTAT GTCGTGCTTA CCGCAGTAGC CTATCTTGTT 
CCCTTGCTGG TGTGGCTCAA TGGTTACTCC GTCTGGGTAT TGCTTTCACT TTTTTCTCTT 
CCGCTTGCCA TAAGCCTGAT CGGGAAGCTT TACCGTTCGG AGGGAAGGGA GCTTAACGCA 
GTGCTTGCGG GAACAGGCAA AGTGATGACC GTTCATGGCC TCCTGTTTTC AGCAGGGCTT 
CTTTTATAA
 
Protein sequence
MSSDPSSVNA SRVTAFQAWM LAIRPKTLPA GAVPVILGSA IAAADGRFSF LPAFVALVCA 
LGIQVATNFI NEIYDFRKGA DTAERLGPTR TVAAGIISEK KMITVSITLL SLVFLLGMYL 
VYTAGWPILL IGLLSMLFAW AYTGGPYPIA YSGLGDLFVF VFFGLVAVGG TYYVQALDLS 
FPVFLAAAAP GAFSVNILLV NNIRDIATDR TVGKMTLPAR IGGSGARSLY VVLTAVAYLV 
PLLVWLNGYS VWVLLSLFSL PLAISLIGKL YRSEGRELNA VLAGTGKVMT VHGLLFSAGL 
LL