| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1703 |
|---|
| Symbol | |
|---|
| ID | 6354010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 1872366 |
|---|
| End bp | 1874003 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642669308 |
|---|
| Product | apolipoprotein N-acyltransferase |
|---|
| Protein accession | YP_001943724 |
|---|
| Protein GI | 189347195 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0815] Apolipoprotein N-acyltransferase |
|---|
| TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00015013 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATC ATCGTCATCC ATTGCATATT TCCGGAAGGT TTTCTTCCGG TTTGCCTCTG
CTGAGCGGTC TTCTTCTCGG CATATCCTTT CCTTCCTATC CGTTTATCCG TCTTGAGTTT
CTCGCATGGA TCGCTTTTGT GCCGCTGCTG ATCTCTTTAC AGCAGGATGA GCCTTCAGGC
AAATCGTACC GTAAGGTCTG GCTTGCCATG TTCGTGTTTT CAGCCATTAC GCTCTGGTGG
GTTTCACTTG CAACCTTTTT GGGAGGCATG CTCACTCTTG CTGCACAATC TTTTTTTCTG
ACGGTTCCAT TTCTTGGTTT TATCGCTGTA AGGAGATGGA AGGGGTTTCG GTTTGCTCTT
TTTTCGTTTC CTTTTTTCTG GACGGCGTGG GAGTGGGCTT ACATGCAGCA GGATCTCTCT
CTTGGCTGGT TGACGCTCGG AAACTCGCAG GCCAACCTTA CCGGTATGAT TCAGTATGCC
GATATAACAG GAGTATGGGG TATCACGTTC TGGCTTCTCT GGTTCAACGT GCTTGTCCTG
CTCCTCTGGA ACAGCAGAAA CGAGTTGTCT CTTCATTTTC GCCTGCTCCC TGTTCTGCTT
CTGATGGTTG CCGCTCCGGT GCTCTATGCG AAGCTTGTTG TCGATGAGCC TGTATCGGGA
GGGGAAAAGA AGGCTTCCGT CAGGGTTTCT CTTGTTCAGC CGAACATCGA TCCCTTCAGA
AAATGGCAGC AGTACACCAG TTACGATATC ATGGAGTTGT ATTACAGCCA GACGAACAGG
CTTGTCCGTC ATGAGCATCC TGATCTGGTC ATATGGCCTG AAACCGCTAT CCCGTTTTAT
ATTCTCGACA GCAGCTATTC GGGTTATCTG CACTCACTTC GTCTTTCTTT GAAGCAGTGG
AATGTCGCCC TTTTGAGCGG GTTTTCCGAT ATTGTCTATT ACCATCCCGA TTCTTTGCAG
GCAAAAAGCA GCACAGTCAG ACTTGATAGC ACCAGCAACC GGTTTTTCGA GACCTTCAAT
GCATCCATGC TGCTGAGACC GGATTTTACA ACGCCCACGG TCTACCATAA GATACGTCTG
GTTCCATTCG CCGAGAGGGT TCCCTATGTT GAGTATTTCC CATGGCTCGA TCGTTTTACT
TTTTCACTTG CTGGTATCAG CAGCTGGGGA AAGGGCACGA GTTGTGAGAT CATGGAGTTC
AATTCTACCG GTAATGGGAC GGTAAAGACA GCGAATATAA TCTGTTATGA GTCTATTTTT
CCGGGATTGG TTTCCGTATT CGTAAAAAAC GGGGCACAGT TTCTCACACT GGTGACCAAT
GACGGCTGGT ATGGAACCTC TTATGGTCCG TATCAGCATG TCGCGATTGC CAAGATACGA
TGTATTGAAA ACCGCAGGGC GATGGCCCGT TGCGCCAATA CCGGAATTTC AGTGTTTATT
GACAGATTCG GTGCCATTTA CAAGGAGATC CCCTGGTGGG AGGTTAAGAC ACTTACTGCC
GATGTCCCGC TTGAGAGTCG CCTTACCTTC TATACCCGTT ATCCCGACAT GCTGCCTCAA
GCTGCATCGG TAGTTTCTTT TCTGCTTGTA ATCTTTGCCG TTTTCAGACG GAAGCCTTAT
GAAAACTGCT CGAAGTAA
|
|---|
| Protein sequence | MSDHRHPLHI SGRFSSGLPL LSGLLLGISF PSYPFIRLEF LAWIAFVPLL ISLQQDEPSG
KSYRKVWLAM FVFSAITLWW VSLATFLGGM LTLAAQSFFL TVPFLGFIAV RRWKGFRFAL
FSFPFFWTAW EWAYMQQDLS LGWLTLGNSQ ANLTGMIQYA DITGVWGITF WLLWFNVLVL
LLWNSRNELS LHFRLLPVLL LMVAAPVLYA KLVVDEPVSG GEKKASVRVS LVQPNIDPFR
KWQQYTSYDI MELYYSQTNR LVRHEHPDLV IWPETAIPFY ILDSSYSGYL HSLRLSLKQW
NVALLSGFSD IVYYHPDSLQ AKSSTVRLDS TSNRFFETFN ASMLLRPDFT TPTVYHKIRL
VPFAERVPYV EYFPWLDRFT FSLAGISSWG KGTSCEIMEF NSTGNGTVKT ANIICYESIF
PGLVSVFVKN GAQFLTLVTN DGWYGTSYGP YQHVAIAKIR CIENRRAMAR CANTGISVFI
DRFGAIYKEI PWWEVKTLTA DVPLESRLTF YTRYPDMLPQ AASVVSFLLV IFAVFRRKPY
ENCSK
|
|---|
| |