Gene Clim_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1685 
Symbol 
ID6353992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1853000 
End bp1853713 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content51% 
IMG OID642669290 
ProductABC transporter related 
Protein accessionYP_001943706 
Protein GI189347177 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.84234e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTTG ACGCAAAAAA CATCAGAAAA TCCTACACCC TTCCCGGACA GGCCCCGATT 
CCGATTCTCA AGGGAATCAA TCTTTCCGTA AAGCCAGGCG AAATGCTCAC GGTAATCGGT
GCATCCGGAA GCGGAAAAAC AACGCTGCTC AATCTGCTCG GAACTCTCGA TACTCCGGAC
AGCGGAGAAT TGCTGTTTGA AGACACCTCC CTGTTCACTA ACGGCAGATA TCTCTTTTCC
CAGAAAGAAC TGGCTGCGTT CCGCAACAAA AAAATTGGAT TCGTCTTTCA GTTTCATCAT
CTGCTCTCTG ACTTTTCCGC AGTCGAAAAT GTAGCTCTGC CGGAATTCAT CGCCACAGGA
AAGTTGCCGG CGGCAAAAAA GCGTGCCGAA TCGCTTCTCT CGGAACTGGG GCTGAAAAAC
CGCTTTGATC ACCTGCCATC GGAGCTCTCG GGCGGTGAAC AGCAACGCGT TGCCATTGCA
AGATCGATTA TGAACAACCC AAGACTGATT CTTGCCGACG AACCGAGCGG AAATCTCGAC
AGCAGGAACA GCCGCATGCT CTATGAACTG ATGGCCGATC TCTGCAGGGA ACGTCAGACA
TCGTTTATCA TTGTCACCCA TAACGAGGAA TATGCCGCCA TGGCAGACCG GTGCCTGCAC
ATGCAGGATG GCCTGCTGCA TGAATGCATG GACAGCTCCG AACTATTTTC ATGA
 
Protein sequence
MLLDAKNIRK SYTLPGQAPI PILKGINLSV KPGEMLTVIG ASGSGKTTLL NLLGTLDTPD 
SGELLFEDTS LFTNGRYLFS QKELAAFRNK KIGFVFQFHH LLSDFSAVEN VALPEFIATG
KLPAAKKRAE SLLSELGLKN RFDHLPSELS GGEQQRVAIA RSIMNNPRLI LADEPSGNLD
SRNSRMLYEL MADLCRERQT SFIIVTHNEE YAAMADRCLH MQDGLLHECM DSSELFS