| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1670 |
|---|
| Symbol | tpiA |
|---|
| ID | 6353977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 1837052 |
|---|
| End bp | 1837807 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642669275 |
|---|
| Product | triosephosphate isomerase |
|---|
| Protein accession | YP_001943691 |
|---|
| Protein GI | 189347162 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.895843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTA CAAACATTGT TGCAGGTAAC TGGAAAATGA ATTTGACCAT TGCCGAGTCC
GTGGAGCTTG CTTCTGCGGT TATCGCAGAG CTTGGCAGCG GTTTTTCAGG GTGTGAAGCC
GGCATCGCTC CAACCTGTCC CGCTCTTTTC GAGACCGGAA AATTACTCGC ATCGGGTTCT
CTTTTTCTTG CCGCACAAAA CTGCCACTAC GAAAACGATG GCGCCTTTAC CGGAGAGGTA
TCTGCAAGGA TGATTCTCGG TGCCGGCTGC ACTTACGTTA TTATCGGTCA TTCCGAGCGT
CGTCAGCTTT TCGGTGAGAC GGATGAAATC GTCAACCGCA AGGTCTCCAA AGCGCTTCAG
GAAGGGCTCA GGGTCATTCT CTGTGTCGGC GAAACGCTCG AAGAGCGAGA AGGCGGTATT
ACCGGCGATG TGGTGACCCG TCAGGTCAAG GCAGGTCTTG CCGGCATTGC CGGCATCGGT
GATCTGGTGA TCGCGTATGA GCCGGTATGG GCCATCGGTA CAGGCAAAAC AGCCTCTTCC
GAGCAGGCGC AGGAAGTGCA TGCTCTTATT CGCAAGACGG TCAGTGAGCT TTATGGAGCA
GAGGCTGCCG ACGGTCTTCG TATCCAGTAC GGAGGAAGCG TGAAGCCTTC GAACGCTGCG
GAACTGTTTG CCATGCCGGA CATCGACGGC GGGCTTATCG GCGGTGCGAG CCTCAATGCA
GCGGATTTTG CCGCTATCGT CAAGGCTGCC TGCTGA
|
|---|
| Protein sequence | MKRTNIVAGN WKMNLTIAES VELASAVIAE LGSGFSGCEA GIAPTCPALF ETGKLLASGS
LFLAAQNCHY ENDGAFTGEV SARMILGAGC TYVIIGHSER RQLFGETDEI VNRKVSKALQ
EGLRVILCVG ETLEEREGGI TGDVVTRQVK AGLAGIAGIG DLVIAYEPVW AIGTGKTASS
EQAQEVHALI RKTVSELYGA EAADGLRIQY GGSVKPSNAA ELFAMPDIDG GLIGGASLNA
ADFAAIVKAA C
|
|---|
| |