| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1640 |
|---|
| Symbol | |
|---|
| ID | 6353946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 1776471 |
|---|
| End bp | 1777448 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642669245 |
|---|
| Product | Nucleotidyl transferase |
|---|
| Protein accession | YP_001943662 |
|---|
| Protein GI | 189347133 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0220979 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCA TCATTCCAGT TGCCGGTGTA GGAACCCGTT TGCGCCCTCA CACCTTCTCA
CATCCGAAAG TACTTCTGAA CGTAGCAGGC AAACCGATTA TCGGACACAT CATGGACAAG
CTCATCGATG CCGGTATTGA TGAGGCAATT GTCATTGTTG GCTATCTCGG CAGTATGGTA
GAGGATTGGC TCAGAAAAAA CTACTCCATC AAGTTCACCT TTGTCAACCA GCACGAACGT
CTGGGTCTGG CTCACGCAGT CTGGATGTGC AAACCCTACA TCAGAAACGA TGAACCGCTC
CTGATCATTC TCGGGGATAC CATTTTCGAT GTAGACCTCC GGCCCGTGCT TGAAAACGAG
GTTTCGACCC TTGGAGTACA CGAAGTCGAC GATCCGCGCA GATTCGGAGT GGCGGTAACG
GAGAATGGAA AAATCATGAA ACTGGTAGAA AAACCCGATG AACCGATCAG CAATCTTGCC
ATTGTCGGTC TCTATTTTCT CCGGCAGGCC GCACCTCTTT TTTCCTCTAT CGATCATCTG
ATCCATAAAG ATATCAAAAC CAAGGGAGAG TACCAGCTCA CCGATGCCCT GCAATACATG
ATCGAGCATG GGGAACCGTT CACGACCTTT CCCGTAAACG GTTGGTACGA CTGCGGAAAA
CCCGAAACGC TGCTCTCAAC CAATGAAACC CTGCTTCAGA AAAAACCGAA ATCAAAAGCA
TACCCCGGGT GCATCATCAA TGATCCGGTA TTCATTGCGG AAAACGCGTC GGTCTCAAAC
GCCATAATCG GCCCTAATGC CACCATCGGC GAACATGCCG TTGTCAGCGA CGCAATTATA
AAAGATTCCA TTATCGGCAA TGACGCCAGA GTAAGCCAGA TCATGCTTGA CAATTCGATT
GTCGGCAACA ATGCCTCAAT CAGCGGTAAT CCTCATGAAA TCAATATCGG CGATTACTCG
GAAATACGGG TGCGGTAA
|
|---|
| Protein sequence | MKAIIPVAGV GTRLRPHTFS HPKVLLNVAG KPIIGHIMDK LIDAGIDEAI VIVGYLGSMV
EDWLRKNYSI KFTFVNQHER LGLAHAVWMC KPYIRNDEPL LIILGDTIFD VDLRPVLENE
VSTLGVHEVD DPRRFGVAVT ENGKIMKLVE KPDEPISNLA IVGLYFLRQA APLFSSIDHL
IHKDIKTKGE YQLTDALQYM IEHGEPFTTF PVNGWYDCGK PETLLSTNET LLQKKPKSKA
YPGCIINDPV FIAENASVSN AIIGPNATIG EHAVVSDAII KDSIIGNDAR VSQIMLDNSI
VGNNASISGN PHEINIGDYS EIRVR
|
|---|
| |