| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1604 |
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| Symbol | |
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| ID | 6354252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1731624 |
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| End bp | 1734293 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642669205 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_001943627 |
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| Protein GI | 189347098 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAATG AACTCTGGCA TACCCTGACT TCAGAGGCAG TGCTCGGCAG CCTCGGCGTA
ACTTCGTCCG GGCTTGGTTC AGCCGAGGCG GATCGCCGTA TTCGGAAGTA TGGCCCGAAC
ATCCTGCAGT CGAAGAAGGG CGTCAGCCCA TGGAGGCTTC TGCTCGACCA GTTTAAAAAC
GTTCTGATTC TTACCCTGCT TCTGGCCACC GTGCTGTCGG CTTTTCTCGG TCACGGACTC
GAAGCTGTCG CGATTACGGT GATTGTGCTC TTCGCCGTGC TGCTCGGTTT CATTCAGGAG
TTCAGGGCGG AAAAAGCCAT CGATGCGCTC CGGAGCATGG CGGCTCCGCA GGCAAGAGTG
ATCCGCGACG GCAGGGAACA GCTCGTTCCG GCTTCAGAGG TCGTGCCCGG AGATATGGTG
ATGCTCGCCG CTGGCGACAG AATACCTGCC GATGCCCGGT TGGTCGTATC GGTCAATCTG
CAGGTAGAGG AGGCCTCCCT GACCGGCGAA TCCCTGCCCT CCGGGAAGGA TGCCGGTGCG
CTTTCGCCCG GAAATGCCGG AATCGGGGAT CGAGGGAACA TGGTGTTCGC CGGAACCGCG
GTGAGTTACG GCCGCGGATC GGCAGTGGTG GTGGCTACCG GCATGCAGAC CGAGTTCGGC
AGGATAGCCG CTTTGCTCCA GCGGGTCGAA ACGGAAAAAA CCCCGCTGCA GAAAAATCTC
GACAAGGTAG GCGCGGCGCT TGCCCGGGCC GCGCTGGTTA TCGTTCTGGT GATCGTGGCT
CTCGGCCTTT TCCGCGGCCA GTCGTTTATC GATATGCTCA TTTTCGGCAT AGCGCTGGCT
GTGGCTGTAG TGCCCGAAGC GCTTCCTGCC GTTGTCACCA TATCGCTGGC GCTTGGTGTA
CAGCGTATGG TCAAGCGCAA CGCCCTCATG CGGAGGCTGC CGGTCGTCGA AACGCTTGGC
AGCACCACGG TGATCTGTTC CGATAAAACC GGTACGCTGA CCCGCGACGA AATGACTGTC
CGGGCGCTCT ACACCTCGGG TTTAATGGTC GAGGTCGGGG GATCGGGCTA TATTCCGCAA
GGCGGCTTTA CGGTTGCAGG CGATGGGCCC CTTCCCGACA GTCTGTTCCG CTTTCTCACG
GCTGGCGTGC TCTGCAGCGA CGCCCGGCTA CTGAAAAACG AAGAGGGCGA GTGGGATATC
AAGGGCGACC CCACCGAAGG TGCGCTTTTG GTGGCGGCAG TGAAAGCCGG ACTTGACATC
GCGGAGTTGC AGGCGCGTTT TCCCCGCCTC GACGAGCAAC CTTTCTCTTC GGAAACGAAG
CGCATGATAA CCCTGCATGA CGAAGGCGGC GCACCGAACG CTTTCATCAA AGGCGCACCT
GAAGTGATTC TTCAGGACAG TGCGACGGTG ATGATGCCCG AAGCTCTCAT CCCTCTGGAT
ACCGCCATGA AGGAACGCCT GCTTGCCGAA GCCGAAGCCA TGGGCCGAAA AGCGCTGCGG
GTGCTCGCCC TTGCCGAAAA CTCCGTCTCC TCTATCGGGA TGGCTTCCGT CGGCATGACC
TTTCTCGGAT TCGCCGGCAT GATCGATCCT CCGAGACCCG AAGCTGCGGA AGCCGTGCAG
CGATGCATCG AGGCCGGCAT CCGCCCGGTC ATGATCACCG GCGACCATCC GGTCACGGCC
GAAGCCATCG CCCGCGAACT CGGCATTCTC CGGGACGGCA GGGTGGTTGA GGGAACGGCG
CTGCAGGAGA TGAGCGATGA GGAGCTGCGC CGCTCAGTCG ATGGCATCAG CGTGTTCGCC
CGTGTTGCTC CCGAACACAA GCTCCGCATT GTCGATGCCC TGCAGAAAAA CGGCGAGATC
GTAGCCATGA CCGGTGATGG GGTCAACGAC GCTCCTGCGC TGAAAAAAGC CGATATCGGC
ATTTCCATGG GTATTACCGG CACCGATGTA TCCAAGGAAG CTTCGGCCAT GATGCTGACC
GACGACAACT TCGCTTCGAT TGTTGCGGCG GTTGAAGAGG GGAGGGGAAT TTATGACAAC
ATCAGGAAAT ATCTGATCTA CCTGCTCTCG TCGAACATCG GCGAACTGGG TCTTATGGCT
GGCGCTTCGC TGTTTGGCAT GCCTTTGCCG CTCACCGCCG TACAGATCCT GTACGTCAAT
CTCGCCACCG ACGGTCTTCC CGCCCTTGCG CTTGCCGTCG ATCCGCCCGA AAAGGATATC
ATGAAACGCC GCCCGAACGA TCCCCGTCAG GGCATTTTCA CCCGCCCGGT GCTTGCGCTC
ATGCTTGCCG GAGGTATCTG GTCCACTTTG GTGAACCTAT CGCTTTTCAA CTGGGCGCTT
CACTCCGGTC GCCCTGTACG TGAGGCGATG ACCATGACTT TCGTCTCTCT GGTGCTGATC
CAGTTTTTCA AGGCATACAA TTTCCGTTCC GAAACCCGTC CGCTCTATTC AAGACCATTC
GCCAATCGGT GGCTGAATCT CGCCATCCTG TGGGAGCTGA TCCTGCTGGT TCTCATCATC
GCGGTTCCTT TTCTTCGGAT ACCCTTCAGC ACCTTCTGCC TTACGGCCGA AGACTGGCTT
ATCGTGCTGC TTTCGTCTCT CACGGTCGTA CCGGTCATCG AACTGGTGAA GCTTATGATC
CGCAAAGGGG TGATTCAGAA AGACAAGTAA
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| Protein sequence | MTNELWHTLT SEAVLGSLGV TSSGLGSAEA DRRIRKYGPN ILQSKKGVSP WRLLLDQFKN
VLILTLLLAT VLSAFLGHGL EAVAITVIVL FAVLLGFIQE FRAEKAIDAL RSMAAPQARV
IRDGREQLVP ASEVVPGDMV MLAAGDRIPA DARLVVSVNL QVEEASLTGE SLPSGKDAGA
LSPGNAGIGD RGNMVFAGTA VSYGRGSAVV VATGMQTEFG RIAALLQRVE TEKTPLQKNL
DKVGAALARA ALVIVLVIVA LGLFRGQSFI DMLIFGIALA VAVVPEALPA VVTISLALGV
QRMVKRNALM RRLPVVETLG STTVICSDKT GTLTRDEMTV RALYTSGLMV EVGGSGYIPQ
GGFTVAGDGP LPDSLFRFLT AGVLCSDARL LKNEEGEWDI KGDPTEGALL VAAVKAGLDI
AELQARFPRL DEQPFSSETK RMITLHDEGG APNAFIKGAP EVILQDSATV MMPEALIPLD
TAMKERLLAE AEAMGRKALR VLALAENSVS SIGMASVGMT FLGFAGMIDP PRPEAAEAVQ
RCIEAGIRPV MITGDHPVTA EAIARELGIL RDGRVVEGTA LQEMSDEELR RSVDGISVFA
RVAPEHKLRI VDALQKNGEI VAMTGDGVND APALKKADIG ISMGITGTDV SKEASAMMLT
DDNFASIVAA VEEGRGIYDN IRKYLIYLLS SNIGELGLMA GASLFGMPLP LTAVQILYVN
LATDGLPALA LAVDPPEKDI MKRRPNDPRQ GIFTRPVLAL MLAGGIWSTL VNLSLFNWAL
HSGRPVREAM TMTFVSLVLI QFFKAYNFRS ETRPLYSRPF ANRWLNLAIL WELILLVLII
AVPFLRIPFS TFCLTAEDWL IVLLSSLTVV PVIELVKLMI RKGVIQKDK
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