Gene Clim_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1563 
Symbol 
ID6354211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1682138 
End bp1682545 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content46% 
IMG OID642669168 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_001943590 
Protein GI189347061 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGATT TCGGCGAAAA CATACCGGAA AAAAAACATA TCGACATGAC CCCGATGATC 
GATATCGTGT TTCAGTTGCT GATCTTTTTC CTGCTTACGT CTATCTATGC AAAACCCGTT
CTGCCGGTCA GTCTGCCTGA AGCATCGTCA TCAATCGTGA AGGAAGAGAC TGATATTACG
ATCAGCATCG ACAACAGCAA GCAGATCTAT CTGAACAATC ACCTGGTTCC GGATAGCCAG
CTCAGAATCG AAATACAAAA GCTGCTTGAA AACAGAACAG ACAAATCGGT ACACCTTATG
GCGGATAAAA CCGTCGATTT CGGTCGGGTA ATCGATGTCA TGGACAGGGC AAAACAGGCT
GGTGCAGGCG ATATTTCCGT TGTAACCGAA AAGCGCGACC CGGAATGA
 
Protein sequence
MIDFGENIPE KKHIDMTPMI DIVFQLLIFF LLTSIYAKPV LPVSLPEASS SIVKEETDIT 
ISIDNSKQIY LNNHLVPDSQ LRIEIQKLLE NRTDKSVHLM ADKTVDFGRV IDVMDRAKQA
GAGDISVVTE KRDPE