Gene Clim_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1544 
Symbol 
ID6354191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1664542 
End bp1665102 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content54% 
IMG OID642669150 
ProductNUDIX hydrolase 
Protein accessionYP_001943573 
Protein GI189347044 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAT ACCCTGAACC GGGTCCGTGG TCAACCCTCT CTTCGGAATA CCTTTACCGG 
CGCCCCTGGC TTACCATGCG CCAGGACAAG GTCAAACTGC CAAACGGCAG GATTATCGAC 
GACTACTACG TCTGGGAGTA TCCGCCCTGG ACCAATGTGC TTGCATTCAC CGGAAAAGGT 
GAAGTTGTGC TGATCCGGCA ATACAGGCAC GGTATAGGAA CGGTTTCATA TGAACTGCCG 
GCAGGCGTGC ATGACAAGCC GGGCGAATCG CTGCTTGAGG CCGCACAGCG GGAACTGCTG 
GAAGAAACCG GTTTCGGAGG AGGAGCATGG AAACCCTGGA TGAAGCTCTC TGCCAATCCT 
GCCCTGCAAA ATAATTTTAC CTGCACCTTT CTTGCCGAAG GCGTTGAGCA GACCGGATCG 
AGACTGCTGG ATTCCACCGA AGAGATCTCC GTTCATCTGG TAACTCAGAA AGAGCTGCAA 
GACATTGTGC TTGAAGGGGA CATGATTCAG GCACTCCATG CAGCTCCGGT GCTGAAATAC 
CTTATGCAGA AAAACCTCTG A
 
Protein sequence
MSEYPEPGPW STLSSEYLYR RPWLTMRQDK VKLPNGRIID DYYVWEYPPW TNVLAFTGKG 
EVVLIRQYRH GIGTVSYELP AGVHDKPGES LLEAAQRELL EETGFGGGAW KPWMKLSANP 
ALQNNFTCTF LAEGVEQTGS RLLDSTEEIS VHLVTQKELQ DIVLEGDMIQ ALHAAPVLKY 
LMQKNL