Gene Clim_1537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1537 
Symbol 
ID6354184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1658775 
End bp1659464 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content55% 
IMG OID642669143 
ProductOmpA/MotB domain protein 
Protein accessionYP_001943566 
Protein GI189347037 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTATA TACACAAACT CACAAAACCC GTTGTCCTGC TCCTTATTAT CGCCATGACC 
TCGCTTAGCT GGGGTTGTCA AAGCACAACC AACGCAGGCA GAGGCGCTGG TTATGGAGCT
GCTGCCGGCG GCGTGCTCGG CGGCATCATA GGCAGCAGAT CGGGCAGTTG GGCCAAGGGT
GCGTTTCTGG GTGCGGTCAT AGGCGGAGCC GCTGGGGCCC TTATCGGTAA CTACATGGAC
AAACAGGCTG CCGAAATCGA TCGGGATGTC GAAGGCGCAA CCGTAGAACG CATGGGCGAA
GGAATCAGGG TAGTGTTCGA TTCCGGCATA TTATTCTCGA CAGGCTCTGC AACCATCACC
GCTACCAGCC GGGACAACAT CGAAAGACTT GCACGCATTA TCAATCGATA TGATGACACA
AACGTCGTCA TCGAAGGGCA CACCGACACT GTCGGCAATG AAGAAAGCAA TCAGCTTCTC
TCGGAGCATC GGGCGGAAGC TGTATCGAAT TTGCTGAAAG CCTACGGCGT ATACGGCAGC
AGACTCTCGC CTGTGGGTTA CGGAGAAAGC CGTCCGGTCG CATCGAACGA AACCGAATCG
GGACGCCGCC TGAACCGCAG GGTAGAAATA CTGATCTATG CCAATGATGA ACTGAAGCGC
GATGCTCAGG ACGGCGAACT GAGGATGTAA
 
Protein sequence
MVYIHKLTKP VVLLLIIAMT SLSWGCQSTT NAGRGAGYGA AAGGVLGGII GSRSGSWAKG 
AFLGAVIGGA AGALIGNYMD KQAAEIDRDV EGATVERMGE GIRVVFDSGI LFSTGSATIT
ATSRDNIERL ARIINRYDDT NVVIEGHTDT VGNEESNQLL SEHRAEAVSN LLKAYGVYGS
RLSPVGYGES RPVASNETES GRRLNRRVEI LIYANDELKR DAQDGELRM