Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1534 |
Symbol | |
ID | 6354181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1654928 |
End bp | 1656193 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642669140 |
Product | protein of unknown function DUF214 |
Protein accession | YP_001943563 |
Protein GI | 189347034 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGA ACCTGCTGCA GTTCCGCTAT GAAACCGCTG AAAGTTTGAA AATCGCACTC TTTCAGATAC AATCGAATAA AATCAGATCG TTTCTTACCG CACTCGGCGT CATTATCGGC ATTGTCTCCA TTACCATGAT GGGCACCGCG ATCAATGGTA TCGACATTGG TTTTGAAAAA AGTCTGTCCA TGATCGGCTA TGATGTGATC TACGTACAGA AAACCTCGTG GAGCACCATG GGAGAGTGGT GGAGATACCG TAACCGTCCC GACCTGAAAA CGGAGTATGC CCAACAGATA AACCGCATCA TTGCCGATAA CCCCGCGACG GAAATTGAAA TTGCCGTACC TCAGATGTCT ACCTATCAGG CAATGGCAAC CTATAAGGAC AGAGTGCTTG AACAGATCTT TTCACTCGGC ACTAACCAGG AATACCTGAA AACCGCATCA GGCGATCTTG CGGCAGGACG CTTCTTCACC CCGGGAGAGT CTGCGGGAAG CGAGATGGTC TGCGTAGTCG GCGACGATAT AGCTTCGGGC CTTTTTCCCA ATGAGAACGC ACTCGGAAAA ACCATAAGCC TGAAAAACCG GAAGTTCAGG ATCGTAGGCG TTTTTAAAAA ACAAGGGAAA TTTCTCGGAC TTTTCAGTTT CGACAACCAG GTCATCATGC CGCTTGGCGC CTTTGAAAAG GTCTACGGGC GAAAGATGTT TGTGACCATA CGGGTTAAAA TCAAGGATGA GAGCCGTGTT GCCGAAGCGA AAGAGGAACT GCTTGGTCTG ATGCGGAGGA TCCGCAGAAT TGCACCCGGA AAAGAGGAGA ATTTCTCGAT AAACGAACAG AAAGCCTTCA AGAGCCAGCT CGACCCGATC AAGAACGGTA TAGCGGCAGC AGGCATCTTT ATTACCGGCA TGTCGCTCTT TGTCGGAGCC ATCGGCATCA TGAACATAAC CTTTGTCAGC GTCAGGGAGC GGACGAGAGA GATCGGCCTG AGAAAAGCGC TCGGGGCAAA AAGAACAACC ATACTGCTGC AGTTCCTTAT TGAATCGGTG ATGATCTGCC TGCTTGGCGG ATTTATCGGC CTGGTGACGG CACTCCTCAT AACCTTTACC ATTGAAAAGG CCATTCCCGA CTTTCCGGTA CAGTTTTCGT TTACCCTGGT ATTTGCCAGC CTCGGTGTTT CAGTGCTCAC CGGTATTATT TCAGGTCTTG CGCCTGCGGT GAATGCATCA AAACTTGATC CTGCAGATTC ACTGCGATAT GAGTAA
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Protein sequence | MKQNLLQFRY ETAESLKIAL FQIQSNKIRS FLTALGVIIG IVSITMMGTA INGIDIGFEK SLSMIGYDVI YVQKTSWSTM GEWWRYRNRP DLKTEYAQQI NRIIADNPAT EIEIAVPQMS TYQAMATYKD RVLEQIFSLG TNQEYLKTAS GDLAAGRFFT PGESAGSEMV CVVGDDIASG LFPNENALGK TISLKNRKFR IVGVFKKQGK FLGLFSFDNQ VIMPLGAFEK VYGRKMFVTI RVKIKDESRV AEAKEELLGL MRRIRRIAPG KEENFSINEQ KAFKSQLDPI KNGIAAAGIF ITGMSLFVGA IGIMNITFVS VRERTREIGL RKALGAKRTT ILLQFLIESV MICLLGGFIG LVTALLITFT IEKAIPDFPV QFSFTLVFAS LGVSVLTGII SGLAPAVNAS KLDPADSLRY E
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