| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1467 |
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| Symbol | |
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| ID | 6354780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1572330 |
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| End bp | 1573856 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642669075 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001943503 |
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| Protein GI | 189346974 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGATC TGCCGCTGAA AATCTTCATC AGCAGCGTTC AGAAAGAGTT TGCCGCTGAG
CGCACAGCAC TGAAAGAGTA TCTGAGGGGC GATCCGCTCA TGCGCCGGTT TTTCGAATGC
TTCCTTTTCG AAGACGAGCC TGCCGCCGAT CAGCGGGCAG ATCAATGTTA TCTCGATGAG
GTTGATCGTT GCGATATTTA TCTGGGTCTT TTCGGCAAAG AGTATGGATG GGAAGATGTC
GACGGTATAT CTCCAACGCA TCATGAGTTC AACAGTGCCT CCGAAAAGGG CAAGAACCGT
CTCATCTACG TCAAAGGTGC TGATGACAGC GTTCGGCATC CGAAAATGCG TGCGTTAATC
GACAATGCAG CCAGCAACCT TATCCGGCGT CGGTTCAACT CCGCTGAAGA GCTTGTTGCC
GCAGTGTATG CAAGTCTTGT CAGGTTTCTC GAAGAGCTGG AACTGCTTCG TTTCGGCCCG
TTCGATGCTA CATTCTGCCG GAACGCAACC ATTGACGATC TCGACGAAGA AAGGATTAGC
CGTTTTCTCG GGCTTGCCCG TCGGGGTCGG AGCTTTCCAT TGCCGGAGAA TACGAAGCCG
CATGATGTTC TTGTCCACCT CAACCTGCTC GACAAGGATC GCCCGACCAA TGCCGCTATC
CTGTTGTTCG GCAAACAGCC TCAGCGCTTT CTGATTACCT CCGAGGTTAA ATGCGCCCAT
TTCCACGGCT ACGAAGTGGA AAAACCCATT CCCTCATATC AGGTGTACAA AGGTACGGTT
TTCGAACTTG TCGATCAGGC CAAGGATTTC GTGCTTTCAA AAATCGATCT CTGGGTTGGA
ACACGAGCTG AAAGCACCCA GGTACCGACG AAATACGAAA TACCGCAGGA GGTTATAGCC
GAAGCTATCG TCAACGCCGT CGTGCACCGC GACTACACCA GCAAAGCGAG TGTACAGGTC
ATGCTCTTCA AGGATCGCCT CGAAGTCTGG AATCCCGGCA CCTTGCCGCC GACTCTGACC
CTCGAAAAGC TGCGCGGTCC ACACGCATCC CTGCCGCACA ACCCGCTCAT CGCCGAACCG
ATGTACCTTA CCAAATACAT CGAGCGCATG GGAACCGGTA TCGGCGACAT GATCCGGCGA
TGCAGAAAGG CTGGATTGCC GGAACCGGAA ATCACGATTG ACGGCGGATT CTGGGTGCTG
ACGATACGGA GGAAAAAATC CGGCTCAGAA ACTCAAGTCA CAGGGCAAGT CACAGGGCAA
GTCACAGGGC AAGTCACAGG GCAAGTCACA GGGCAAGTCA GGCAGTTATT AAGTGTTGCG
CAGGGTGATA TGTCACGCAA AGAGATGATG ACAGCATTGA GTCTGTCGAG TAGAGATAAT
TTCGAAAAGC TCTATCTGCG ACCGGCTCTG GTGGCAGGAT TTCTTGAACT GACGATACCA
GGCAAGCCGA AAAGCCGCTT ACAGAAATAT CGTATGACAT CGAAAGGAAA AGAGCTTCTT
CAATCGCTCG ATCAGAAAAG GATGTAG
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| Protein sequence | MLDLPLKIFI SSVQKEFAAE RTALKEYLRG DPLMRRFFEC FLFEDEPAAD QRADQCYLDE
VDRCDIYLGL FGKEYGWEDV DGISPTHHEF NSASEKGKNR LIYVKGADDS VRHPKMRALI
DNAASNLIRR RFNSAEELVA AVYASLVRFL EELELLRFGP FDATFCRNAT IDDLDEERIS
RFLGLARRGR SFPLPENTKP HDVLVHLNLL DKDRPTNAAI LLFGKQPQRF LITSEVKCAH
FHGYEVEKPI PSYQVYKGTV FELVDQAKDF VLSKIDLWVG TRAESTQVPT KYEIPQEVIA
EAIVNAVVHR DYTSKASVQV MLFKDRLEVW NPGTLPPTLT LEKLRGPHAS LPHNPLIAEP
MYLTKYIERM GTGIGDMIRR CRKAGLPEPE ITIDGGFWVL TIRRKKSGSE TQVTGQVTGQ
VTGQVTGQVT GQVRQLLSVA QGDMSRKEMM TALSLSSRDN FEKLYLRPAL VAGFLELTIP
GKPKSRLQKY RMTSKGKELL QSLDQKRM
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