Gene Clim_1384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1384 
Symbol 
ID6356154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1489806 
End bp1490510 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content56% 
IMG OID642668994 
Productprotein of unknown function DUF159 
Protein accessionYP_001943423 
Protein GI189346894 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.243083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGGAC GATTCGGATT TTTCGAACTG CGATATTTTC TCGACCGGCT CCGCGAGCTT 
GAGCTGCCTT TCGAAGAGAA TGAGCACTAC GGCTTCATGC CGGGTTACAA CATCGCTCCC 
GAAAGCACGA TTACCGTGCT GCTCGGGAAG AAGGGCTCCA ATGTGCTCTC CAATGCGCAC 
TGGGGTCTGA TTCCCCACTG GGCAAAAGCC CTGCCGAAGG TGCGGCCCAT CAACGCACGG 
GCGGAAAGCC TCGGCGTGAA ACCCTATTTC CGGCACATGC TGAACCACCG CCACTGCCTG 
ATTCCTGCAA GCGGATTTTA CGAGTGGAGC GACATGCGTG ACGCGAGTGT CAAAAAACAG 
CCCTGTTACA TACACCGGGC CGACGGGCAT CCGATGGCGT TTGCGGGTCT CTGGGACACC 
TGGGAGCCGA CCGGGCGTGA GAAACCGGCA GTTACCTCCT GCACCATCAT CACCACGGCC 
GCTAATCGCG AGATGCGGCC AATACACGAG CGCATGCCGG TGATCCTCGA ACCGGAAACA 
TGGAGGCTAT GGCTGGAACC GGAAACAGGT TTTGCCGAAA AATTGCTTAA ACCTGCTGCT 
GAAGGGATTC TGGAACTTTA CCCGGTCTCG ACCAGAATGA ACAATCCGCA ATACATCCGA 
AAAGATTGCA TCGAGAAGCT CGATGCATCG GTACAGGGAA AATAG
 
Protein sequence
MCGRFGFFEL RYFLDRLREL ELPFEENEHY GFMPGYNIAP ESTITVLLGK KGSNVLSNAH 
WGLIPHWAKA LPKVRPINAR AESLGVKPYF RHMLNHRHCL IPASGFYEWS DMRDASVKKQ 
PCYIHRADGH PMAFAGLWDT WEPTGREKPA VTSCTIITTA ANREMRPIHE RMPVILEPET 
WRLWLEPETG FAEKLLKPAA EGILELYPVS TRMNNPQYIR KDCIEKLDAS VQGK