Gene Clim_1312 details

Gene Information

• Locus tag: Clim_1312
• ID: 6354505
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: -
• Start bp: 1412882
• End bp: 1414759
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 642668927
• Product: Protein-disulfide reductase
• Protein accession: YP_001943357
• Protein GI: 189346828
• COG category: [C] Energy production and conversion; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4232] Thiol:disulfide interchange protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0091784
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGTAA ACCGCAATAT TATGTTACAT CGTACGATAT CGATATCCGG ATTTCTGCTT 
TTTTGGCTGA TTGCCTTTTC CTCCAACGGA TTCGGTACGG CATTTCTCGA TCCCGGACAA 
GCCTTCAGGC TGAAAGCCGA ACTTACGTCG TCGGGTTCCG TCGTGCTCGA CTGGGCGATA 
GCCGACGGGT ACAAACTCTA CAGAGACCAG GTAAAGGTGA GTCTCGAAAA AGGCGATGCC 
GAACTGCGCA TACCCGGGCT GCCGGCGGGG GAGTCGGTTA CCGATCCTTC GACGAAAGAA 
CGGATGGAGG TCTATCACGA TAACCTTCGC ATCGAAGTGC CTGTTGTCAG GGCTGCCGGC 
GAATTTACCT TGAAGGTAGT CTATCAGGGG TGCGCCGAAG ACGGGGTCTG TTACCCCCCG 
TTTACCCGAA CCGTCACCAT CGATCCGGCA AAACCCGGGG TGCTGAACGT CGTCGAAGAT 
CCTGAAACCG GCGGCTTCGG AGGCTTTGCC GTTACGGAAG ATGTGCCAGT CGATAGCCTG 
CCGGCAGCAC GGGAGAAAAA GGCCGGCGAT GATTTCTCCT ATTCGCAATC CCTTCTCAAG 
AGCCGAAGCC TCCTGAAAAT CGGCTTTTTC TTTCTGATTT TCGGCCTGGC GCTCTCCTTT 
ACGCCCTGCA TTCTGCCGAT GATCCCCATT CTTTCCTCGA TTATTGTTGG AGACGGCTGT 
TACGGACGAG GGCGCAGTTT CATGCTCGCC GTAGCCTACA GCCTCGGCAT GGCGCTGGTT 
TACACCCTGC TTGGCGTCGC AGCCGGACTT GCCGGTGAAG GGCTTGCCGG AGCCCTGCAG 
CAACCCTGGG TGCTCGGGAT GTTCGCGCTT TTGCTTGTGG TACTTGCCCT TTCGATGTTC 
GATGTTTACC AGCTGCAGAT ACCCGGCATC ATGCAGAGCA GCATAGCCAA AACCTGCGGC 
AAACTCAAAG GCGGCCAGAT TGCCGGAGTG TTCCTTATGG GATCCCTTTC CGCGCTGATC 
GTCGGACCCT GCGTTGCCGC TCCGCTTGCC GGCACCCTGG TCTATATCAG CCAGACCCGC 
CACGTGGTGA TCGGCGGGCT CGCGCTCTTC TCCATGGCGA TGGGCATGAG CATGCCGCTG 
CTGCTGGTCG GGCTTTCCGC AGGAACCCTG CTTCCGAAAG CCGGCGCATG GATGAACGGA 
GTCAAATACC TCTTCGGGCT TATGCTTATT GGCGTGGCGA TCTGGATGGT CTCTCCGGTG 
ATTCCCGGTC CTCTGGCGCT GCTTTTCTGG GGAGCTTTAG CCATGCTCTG TGCGGTTTTT 
CTGCACCTGT TCGACTCGCT GCCTGAACAA TCGTCCATCG CCATGAAGTT CGGCAAAGCG 
CTTGGTATTG TCCTGCTCGT TATCGGCATC CTCGAACTGG CCGGAGCCGC CGCAGGCGGA 
ACCAATCCCC TCGAACCGCT TGCACCTTTC GGCTCAGGTG CGGGGGGCAG AACATCTGCT 
GAGGAGGCGG GACTGAAGTT CACTCGTATC CGTTCCTATG CCGAGCTCGA CGCCGCGCTT 
GCATCGGCGG AAAAACCGGT CATGCTCGAC TTCTACGCCG ACTGGTGCGT CTCCTGCAAG 
GAGCTGGAAC ATTTTACCTT CAATGACCCG GCCGTGTGCA AACAGCTCGA AACCATGACC 
CTCCTGCAGG TTGATGTAAC CGCCAACACC CCCGACGACA TAGCTCTCAT GAAGCGGTTC 
GGCATATTCG GCCCTCCCGC CATCATTTTC TTCGACGCTT CCGGCAACGA GATCCCCGGC 
AGCAGGGTCG TCGGGTTCGT CGAAGCAAAA CCCTTTCTCG ATCATCTTGA CCTGTATTTA 
ACCCGGAATT TACCGTAA 

 

Protein sequence

MPVNRNIMLH RTISISGFLL FWLIAFSSNG FGTAFLDPGQ AFRLKAELTS SGSVVLDWAI 
ADGYKLYRDQ VKVSLEKGDA ELRIPGLPAG ESVTDPSTKE RMEVYHDNLR IEVPVVRAAG 
EFTLKVVYQG CAEDGVCYPP FTRTVTIDPA KPGVLNVVED PETGGFGGFA VTEDVPVDSL 
PAAREKKAGD DFSYSQSLLK SRSLLKIGFF FLIFGLALSF TPCILPMIPI LSSIIVGDGC 
YGRGRSFMLA VAYSLGMALV YTLLGVAAGL AGEGLAGALQ QPWVLGMFAL LLVVLALSMF 
DVYQLQIPGI MQSSIAKTCG KLKGGQIAGV FLMGSLSALI VGPCVAAPLA GTLVYISQTR 
HVVIGGLALF SMAMGMSMPL LLVGLSAGTL LPKAGAWMNG VKYLFGLMLI GVAIWMVSPV 
IPGPLALLFW GALAMLCAVF LHLFDSLPEQ SSIAMKFGKA LGIVLLVIGI LELAGAAAGG 
TNPLEPLAPF GSGAGGRTSA EEAGLKFTRI RSYAELDAAL ASAEKPVMLD FYADWCVSCK 
ELEHFTFNDP AVCKQLETMT LLQVDVTANT PDDIALMKRF GIFGPPAIIF FDASGNEIPG 
SRVVGFVEAK PFLDHLDLYL TRNLP