Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1281 |
Symbol | |
ID | 6355382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1381492 |
End bp | 1382565 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642668897 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_001943327 |
Protein GI | 189346798 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.036609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATAT CGATACCCAG CATCATCAGT AAACCCGCAG CCATCATCGC AGCGGTGATC GTCGTGCTCC TTTTTATTGG ATACCGGTTC TTTTTCGGCG CAGCAGCTGT CGAGATCCTG ACCGTGCAGC AGGGCTCGGT AGAAGAACTT GTGCACGGCC CTGCCCGAAT CCGAGCCAGG GTGCCGGTAT CGGTCAGCTC CCGTTTTGCT GCTGAAATCC TCGATATCAC GGTCGATATA GGCGACAGGG TGCATGCCGG GCAGCTGCTT GTGCGCCTCG ACGATCGCGA CCTGCAGGCC AGAACGTCGG CATCGCGTGC CATGCTTGCC CGAGCGGAGG CCGATCTTGC GCTTGCAGGG AGCAACGAAC AACGCGACCG CGAGGTATTC GAAAAGGGGT ACATCAGCCG TGCAGCCATG GAGGCGACCT CTACCCTGCG CAGGCTCAAA CAGGCCGAAG TTACCGTCGC AAGAGAGGAG GTCTCATACG CCGCCACCCA GTCCGAACAC GCCATGCTCA TCGCCCCCAT GGATGGCATC GTTACGGCAA GGCTGGCTGA AGCAGGCGAC AATGCTGCAC CGGGGGCTCC AATTCTGCGC ATGGTCGATC CCCGTACCCT TCAGGCGGTT GCACTGATTG ACGAAACCGT TGCAGGCAGC ATCAGACCGG GCATGCCGGC CACTATCCGC AAGCGCACCG GCGGATCAAG TGCCGGACGT GTCTCGCGTA TCCAGCTCGA AGCGAATGCC GCCGCACGCG AGTTCCAGGT GGAGGTGGAC TTCGTGGAGC CTCCCGCTCG CTTTGCCATC GATCAGGAAG CCGAAGTCAC CATCACGACA GGCAGGCAGA AGGGGATCGT TATACCGCTT ACCGCACTGC GGCAGCAGGA GAGCGGCCGG GATGGCGTGC TTGCAGTTCG CAGTGGACGT GCGGTTTTCC AGCCGGTTGA AACCGGTGTT TCCGACGGGA AGCGCGTCCT CGTCAAAACG GGGATCAAGA GTGGTGAACA GATTGTACGC AATGCAACGG GCATTAAACC CGGAAGCCGC GTACGCGCAA AAGCAGGGGA GTGA
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Protein sequence | MSISIPSIIS KPAAIIAAVI VVLLFIGYRF FFGAAAVEIL TVQQGSVEEL VHGPARIRAR VPVSVSSRFA AEILDITVDI GDRVHAGQLL VRLDDRDLQA RTSASRAMLA RAEADLALAG SNEQRDREVF EKGYISRAAM EATSTLRRLK QAEVTVAREE VSYAATQSEH AMLIAPMDGI VTARLAEAGD NAAPGAPILR MVDPRTLQAV ALIDETVAGS IRPGMPATIR KRTGGSSAGR VSRIQLEANA AAREFQVEVD FVEPPARFAI DQEAEVTITT GRQKGIVIPL TALRQQESGR DGVLAVRSGR AVFQPVETGV SDGKRVLVKT GIKSGEQIVR NATGIKPGSR VRAKAGE
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