Gene Clim_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1280 
Symbol 
ID6355381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1380295 
End bp1381488 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content58% 
IMG OID642668896 
Productprotein of unknown function DUF214 
Protein accessionYP_001943326 
Protein GI189346797 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0216848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTTG CAATCAAGGA TGTACAGCGC CATGTCGGCA AATTCATCGC CACCATTATC 
GGGGTCGGTA TGCTGATGGC AATCGTGCTC ATCATGAACG GCATCTATCA GGGCAACACC
TCTGACGGAG TCTGGTTAAT CGACAATACC GCGACAGACC TCTGGGTGGT TGAGAGGGGC
CGCGGAGGGC CATTCAACGA GCAGTCGCGC ATAGACGAAG AGAGCTGGAG AAGCGTAGCC
GCCATATCCG GCGTCGCCAA GGCCAGCCCC TTCATCAGCT ACACGGTACA GCGTCACGTG
GCGGGACGCG CTCAGCATTT CACCATCATC GGCTATGATG TGTTCGGTGG CCTGGGTGGA
CCGGGTAGAA TCGTTGCAGG ACGACCCATC TCCCAGGCGC ACTATGAAGT TGTCGCCGAC
ATGAAAATCG GTCTCAGGCT TGGGGAAATG CTCCGCCTCG GCGTGCACGA CTACACGGTG
GTGGGGCTTA CCCGCAAGGC TGTCGATGCC GCAGGCAACT CGCTGCTCTA CCTCTCACTG
CCCGATGCGC AGGAGGTGCT CTACGATCAG GATAACCGTG CGCGCGACCG CGAGCGTTCG
GCGGAAACAG AGCGGCTTCT CAGGGCAGGT TACACTCCCG CAGAGTCGCA GCGTCTGCTC
CCCCTGTTCT CGGGCGGCGG CGGAACCATC AATGCCGTTC TCGTTAAGCT CCAGCCCGGG
GCCAGCACAC AGCGCGTTGT TTCCGATATC GAGAGGTGGC TCTACCTGAG CGTCTATACA
ACCGATCAGC AGCGCGATCT CATGATTGAA GGAAAGCTCA AAAAAATGGC GGCCATTCTC
GGTCTTTTCC GGTTACTGCT CGTGATTGTC TCTCTGGTGA TCATAGCCCT GCTCATCTAT
GTGCTTACAG TCGAAAAAAT CAAGGCTATA GCCACGCTCA AGCTTATCGG GGCGTCGAAC
GGCATCATCG TCCGCCTCAT TCTCGAACAA TCGATCGTGC TGACGGTATC GAGCTTCATC
TTCGCATGGG TGGTGGTGCA GCTTACCTAC GATCACTTCC CGCGCACCCT TGTGCTCCTG
CCGCATGAGA CGCTGGCAAG TTTTATCATT TTCTTCATCG GGGGGATGGC ATCGAGCCTT
GTCGGCATCG TGCACGCACT GCGCACGCCT CCTTCACTTG CACTGGGAGG CTGA
 
Protein sequence
MDLAIKDVQR HVGKFIATII GVGMLMAIVL IMNGIYQGNT SDGVWLIDNT ATDLWVVERG 
RGGPFNEQSR IDEESWRSVA AISGVAKASP FISYTVQRHV AGRAQHFTII GYDVFGGLGG
PGRIVAGRPI SQAHYEVVAD MKIGLRLGEM LRLGVHDYTV VGLTRKAVDA AGNSLLYLSL
PDAQEVLYDQ DNRARDRERS AETERLLRAG YTPAESQRLL PLFSGGGGTI NAVLVKLQPG
ASTQRVVSDI ERWLYLSVYT TDQQRDLMIE GKLKKMAAIL GLFRLLLVIV SLVIIALLIY
VLTVEKIKAI ATLKLIGASN GIIVRLILEQ SIVLTVSSFI FAWVVVQLTY DHFPRTLVLL
PHETLASFII FFIGGMASSL VGIVHALRTP PSLALGG