Gene Clim_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1276 
Symbol 
ID6355377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1377758 
End bp1378576 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content53% 
IMG OID642668892 
ProductBeta-lactamase 
Protein accessionYP_001943322 
Protein GI189346793 
COG category[V] Defense mechanisms 
COG ID[COG2602] Beta-lactamase class D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.261729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC AGGTTGTGAA CTCAAAACGT CCAGTTCTCC GGGGGATACT CTTTCCGCTC 
ATGCTTTTCA TCCTGTTTCC GTCTCCTGCA GCAGCAGCAG GGGACACGGC TATTGCCGAA
CTGTTCTGCC GGAAAGGAGT CGAGGGAACA CTGGTGCTTT CGTCGCTGAA GGGCGGCCAG
CGATTCGTGC ACAATGAAGA GCGGGCAAAA CGGAGGTTTC CCGTGGCATC GACATTCAAG
ATACTCAACA CCCTGATCGC ACTGGAGGAG AAGGTTGCGA CGGGAAAGGA TCATCTGATA
AGGTGGGATG GCAGGCGGCA TGATTTCCCC GACTGGAACC GCGACCAGAC TCTGGAGAGC
GCGTTCAGGG TTTCCTGCGT CTGGTACTAT CAGGAGCTTG CCCGCCGGAT CGGAGCTGAT
ACGTATCGAC GCTATCTCGG GGAATCGTGT TATGGAAAGC TTGACGAACC GTTCGATGCA
ACGACATTCT GGCTCGATGG TTCTCTTCAG GTCAGCGCGA TGGAGCAGGT GAGTTTTCTC
CGGAAGGTCT GTCTTCGATC ATTGCCGTTC AGCGATACCA CCTATGAGTC TTTGAGGGAG
ATCATGCTTG CCGAAAAAAC GCAGGATTAT GCACTGCGTG CGAAAACGGG CTGGGCAACG
AGTGCAACCC CTGCGGTTGG ATGGTATGTC GGTTATGTTG AAACGTCTGC GGATATATGG
TTTTTTGCGC TGAACATTGA TATCCCTGAT CCACAGGAGC TGCCGCTACG GCAGGTGCTG
GTTCGCGAGG TGCTTCGCAG TAAAAACATT ATAGATTGA
 
Protein sequence
MKKQVVNSKR PVLRGILFPL MLFILFPSPA AAAGDTAIAE LFCRKGVEGT LVLSSLKGGQ 
RFVHNEERAK RRFPVASTFK ILNTLIALEE KVATGKDHLI RWDGRRHDFP DWNRDQTLES
AFRVSCVWYY QELARRIGAD TYRRYLGESC YGKLDEPFDA TTFWLDGSLQ VSAMEQVSFL
RKVCLRSLPF SDTTYESLRE IMLAEKTQDY ALRAKTGWAT SATPAVGWYV GYVETSADIW
FFALNIDIPD PQELPLRQVL VREVLRSKNI ID