Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1204 |
Symbol | |
ID | 6353721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1298908 |
End bp | 1300479 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642668820 |
Product | carbohydrate kinase, YjeF related protein |
Protein accession | YP_001943250 |
Protein GI | 189346721 |
COG category | [G] Carbohydrate transport and metabolism [S] Function unknown |
COG ID | [COG0062] Uncharacterized conserved protein [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.128075 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCCAG TAGTGACCGC GGCAGAAATG ATGAGAGCAG ACAGTGCCGC TATAGACGAT CTCCAGGTCG GAGCGATACG GCTTATGGAA CTTGCCGGAG CCCGTACATC GGATCTCGTC AGGGAACTTA TCGAAAAAGA AAATATCTCC GGCAGCAGTT TTCTTGTAGT CTGCGGCAAG GGCAACAATG GCGGCGACGG TCTGGTACTT GCCCGTCATC TGCTGAACCA CGGCGCGGAA GTCGATATCC TGCTGCTCTA CCCGGAAACG GATTTATCCC CGATCAACCG CAATACTCTT GACACTCTCT GTGGCTACCA AGCCCTGAGC GGACGTCTGC GGATCTTTCA TGGTCACGCT GAGGCCCTGC CTTTCGTCAG GGATACACAC TATGAAGTTC TGATCGATGC GATACTCGGT ACCGGGCTGA AACTCCGCCG ACAACTCTCA TCACCGCTAT GCGAAGGTAT TGATCTGCTG AACGGCATCC ATGACCGTGC CGGGTCGCCA CTCATAGCAC TCGATATTCC TTCAGGTCTC GATGCGACAT CCGGCGTTGC CGCCGAAAGG TGCGTTCTTG CCGATATGAC GGTTTCCATG GCTTTTCTGA AAACTGGATT TTTTTTCAAT GACGGTCCAC TCCACTGCGG AGAGCTCCGT ATCGCCGACA TATCGATCCC GGAATTTCTG ATCGCCCCTT CAGCCTGCCG TTTAACCGAT AAAGAGTATG CCGCGGAACA TTTTATTCTG AGAGAGCCTG AGGGTGCAAA GCACCAGAGC GGAAAGGTGC TTATTGTCGC CGGATCGCAA TCCGATAACG CTTCTATGCT TGGAGCGGCA ATGCTTGCCG TTAAAGCCGC ACTCAAAACC GGTGCCGGAT ATGTGTGTGC GGCCATCCCC ATTGCCGCTG CGGGCGTGCT GCATTCCTAT GCGCCGGAAG CAGTCGTCAT TGCCCAGGAG ATGGACGCCA TCCTCGAAAA AGCCGGATGG GCAGATGCTG TGCTGATCGG ATGCGGACTT GGAAGGGATC CGAAAACTGT AGATTTCATT CGCGAGCTGC TCCGGAAACC CGAAATAACA GGCTGTAAAC TCGTGCTTGA CGCCGATGCG CTCTTTGCCC TTTCCGGTGT TGCCCTGCCT GCATCCGGAA TCGATTTCGC CAATACCATA CTGACGCCGC ATTACGGAGA ATTCAGCCGG CTTTGCGGCC ATACGGCAGA CGAGATTGCT CTGAACGCGC TTGTGCTCGC GACTGATTTT GCACGGCTAA ACAGGGTCAA TCTGCTGCTC AAGGGCCATC CAACTCTGAT TGTCGGTGGC GAGGAGGGGC TTATGCTTAA CGACTCGGGC ACTGAAGCGC TCTCTACCGC CGGCTCCGGA GATATCCTGG CCGGGATGAT TGCAGCGATT GCTGCAAAAG GAGCCGAAAT ACTCGACGCA GGAGCGGCGG CGGCCTGGTT TCACGGCAGG GCTGGAGATC TGGCAAATGA CATTTCCAGC CTGGTATCGG CAAACGACAT CCTCAATGCC ATACCTGAAG CTGTGCAGGA AATTTTTTCC CTGGAGGAGT AA
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Protein sequence | MLPVVTAAEM MRADSAAIDD LQVGAIRLME LAGARTSDLV RELIEKENIS GSSFLVVCGK GNNGGDGLVL ARHLLNHGAE VDILLLYPET DLSPINRNTL DTLCGYQALS GRLRIFHGHA EALPFVRDTH YEVLIDAILG TGLKLRRQLS SPLCEGIDLL NGIHDRAGSP LIALDIPSGL DATSGVAAER CVLADMTVSM AFLKTGFFFN DGPLHCGELR IADISIPEFL IAPSACRLTD KEYAAEHFIL REPEGAKHQS GKVLIVAGSQ SDNASMLGAA MLAVKAALKT GAGYVCAAIP IAAAGVLHSY APEAVVIAQE MDAILEKAGW ADAVLIGCGL GRDPKTVDFI RELLRKPEIT GCKLVLDADA LFALSGVALP ASGIDFANTI LTPHYGEFSR LCGHTADEIA LNALVLATDF ARLNRVNLLL KGHPTLIVGG EEGLMLNDSG TEALSTAGSG DILAGMIAAI AAKGAEILDA GAAAAWFHGR AGDLANDISS LVSANDILNA IPEAVQEIFS LEE
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