Gene Clim_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1196 
Symbol 
ID6353713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1289882 
End bp1290748 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content53% 
IMG OID642668812 
Productoxidoreductase FAD/NAD(P)-binding domain protein 
Protein accessionYP_001943242 
Protein GI189346713 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAGACA ACACACAGAA CGGCCAGCAG AACATCTACA GGCCGGCAAC CATGAAAATC 
GTCGCAAAAC GCGACGAAGC TCCAGGCGTT AAAACATTGA GGCTCGAGTT CCAGAACCCG
ACCGACCACG AGCAGTTCAA ACAGCGCTAC CGTACGGGAA TGTTCGGGCT TTACGGCATC
TATGGCGAAG GTGAAAGTAC CTTCTGCGTC GCCAGTCCTG AAACCCGCAA CGAGTATATC
GAGTGCACCT TCCGCCAGTC AGGAAGGGTT ACCGCAGCGC TTGCAAGCGC AGAAATCGGT
GATCTGGTTA CCTATCGCGG CCCATACGGA AATCGCTTCC CTATCGAGGA TTTCTATGGT
AAAAACCTGC TTTTCATAGC AGGCGGGATT GCGCTTCCGC CTACCCGAAG CGTTATCTGG
TCGTGCCTGG ACCAGAGGGA TAAATTCGGC AAGATAACCA TTGTTTACGG AGCGAGAACT
GTTGCGGACC TCGTTTATAA ACATGAGCTT GAAGAGTGGC AGAGCCGCAG TGATATCGAA
CTGGTTCTGA CCGTCGATCC GGGAGGAGAA TCTCCTGACT GGCAGCACCG GATAGGATTT
GTACCCTCCA TTCTCGAACA GGCGGCACCT TCTGCGGAAA ACTGCATCGC AGTGCTGTGC
GGACCACCGA TCATGATCAA GTTTACCCTG ATCTCGCTGG GCAAGCTCGG GTTCAATGAA
GAGAATGTGT ATACCACTCT TGAAAACCGA ATGAAATGTG GCGTCGGCAA ATGCGGCAGA
TGCAATGTGG GTTCGGTTTA CATCTGCAAG GAAGGACCGG TCTTTACGGC TGCAGAGGTA
TCCCGTATGC CTGCCGGAGA CCTGTAA
 
Protein sequence
MTDNTQNGQQ NIYRPATMKI VAKRDEAPGV KTLRLEFQNP TDHEQFKQRY RTGMFGLYGI 
YGEGESTFCV ASPETRNEYI ECTFRQSGRV TAALASAEIG DLVTYRGPYG NRFPIEDFYG
KNLLFIAGGI ALPPTRSVIW SCLDQRDKFG KITIVYGART VADLVYKHEL EEWQSRSDIE
LVLTVDPGGE SPDWQHRIGF VPSILEQAAP SAENCIAVLC GPPIMIKFTL ISLGKLGFNE
ENVYTTLENR MKCGVGKCGR CNVGSVYICK EGPVFTAAEV SRMPAGDL