Gene Clim_1079 details

Gene Information

• Locus tag: Clim_1079
• Symbol: cobT
• ID: 6355721
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 1182900
• End bp: 1183970
• Gene Length: 1071 bp
• Protein Length: 356 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 642668696
• Product: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
• Protein accession: YP_001943127
• Protein GI: 189346598
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2038] NaMN:DMB phosphoribosyltransferase
• TIGRFAM ID: [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACATTGC TTGAGCAGTT TGCATGCCTG CTGGACGGGA TCAGGCCGGT TGACCGGTCG 
CTGGTGCCGG TAATTCAGGC CCATCTTGAC GATCTTACCA AACCGCAGGG CAGCCTTGGC 
CGTCTTGAGG AGATTGCCAT GAGCTATGCC CTTGCGACCG GTTCTCCGGT TCCTGTGCTC 
GATAAAAAGA AAATATGCTG CTTTGCCGCC GATCATGGCG TGGCTGCCGA AGGAGTATCG 
GCTTTTCCGG CGGAAGTCAC CCCGCAGATG GTGTATAACA TGGTGCAGGG GGGAGCTGCC 
ATCAATGTGC TTTCAAAACA TGCCGGAGCC GATCTCGATG TTGTGGATGT CGGGGTCAAT 
CATGATTTTC CCGATATGCC GGGACTTATC CGGAAAAAGG TGGGGTATGG CAGTTCCAAT 
ATTTCCAGCG GTCCGGCAAT GAGCGAAACG GAAACGCTTC AGGCTGTCCT GTGCGGAGCC 
GAGCTTGCCG TTGATGCGCA TAAATCAGGA TACCATCTGC TTGGAACCGG TGAAATGGGC 
ATTGCCAATA CGACTCCGGC AACGGCACTC TTTTCCGTAT TGCTCGGCGT TTCTCCCGAA 
ACCATTACCG GAAAGGGTAC CGGGATTGAC GATAGTAGAC TGGAACACAA AAAAAAGATC 
GTCAGGAAAG CAATCGAGGT CAATGCATCG CGATGCTCTA CGCCGTTCGG GACGCTTGCC 
GCACTCGGAG GATATGAAAT TGCAGCTATC TCGGGTTTTG TGCTTGGAGC CGCCTCATGC 
AGGCTTCCGG TTGTTGTCGA TGGATTTATC TCCTCATCGG GTGCGGTTGC CGCCATGAAG 
ATCTGCCCTT CGGTGATCGA TTATATTTTT TTCAGCCACC TCTCGAATGA ACAGGGGCAT 
AGAGCCGTTA TGCAGCAGCT TGGCGCTCGG CCGATCCTTG ATCTCGATCT CCGTCTGGGT 
GAAGGAACCG GAGCGGCCCT TGCCATGCAG GTAATTGCAG GTGCCGTGAA ACTGTATAAT 
GAAATGGCGA CATTCAGTTC GGCAAGGATA AGCGAAAAAG AGACAGTCTA A 

 

Protein sequence

MTLLEQFACL LDGIRPVDRS LVPVIQAHLD DLTKPQGSLG RLEEIAMSYA LATGSPVPVL 
DKKKICCFAA DHGVAAEGVS AFPAEVTPQM VYNMVQGGAA INVLSKHAGA DLDVVDVGVN 
HDFPDMPGLI RKKVGYGSSN ISSGPAMSET ETLQAVLCGA ELAVDAHKSG YHLLGTGEMG 
IANTTPATAL FSVLLGVSPE TITGKGTGID DSRLEHKKKI VRKAIEVNAS RCSTPFGTLA 
ALGGYEIAAI SGFVLGAASC RLPVVVDGFI SSSGAVAAMK ICPSVIDYIF FSHLSNEQGH 
RAVMQQLGAR PILDLDLRLG EGTGAALAMQ VIAGAVKLYN EMATFSSARI SEKETV