Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1006 |
Symbol | |
ID | 6355455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1097829 |
End bp | 1099019 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642668630 |
Product | putative iron complex transport system substrate-binding protein |
Protein accession | YP_001943061 |
Protein GI | 189346532 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.568283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGACGT TCGGGTTTCG TTATCCGGGC AGGAGTGGAA GCATCCTGCT CCTGTTTCTG CTTCTGCTTG CCGCCTGTAC ACCTGCAGGC CGGCAGACCG GCAGCAGGCA GCAGGCTGAT CGGGAGGCGG GCGAGGTGCG CTATGCAAGG CTGTTCACCA TCGCCAGGGA GAACGGCTGT ACCCGGATCA CGGTTGCCGC CGCGGATTCC GCCAGCCGGC AGGATCCCTT CACCTATCTG CTCGTGCCGG AAGAAAAGCC TGTTCCCGAA GACGCGGGCG AAGCGATGGT GGTCAGAATC CCGCTGAAAA AGGTTACCTG TGAAAACGGC TTTCAGGTGT CGCTGCTCCA GATGCTCGGT CGATCCGCCG CTCTTGCCGG CGTGTCGGGA AAGCAGCGGG TCGGTCAGGA CGACGTGCAT CGAAAGATCG ACAGCGGGGA GCTTGCCGTG ACCGGATTCA TGAGGGGAAT GAACATGGAG CGCCTGCTGA AGACCGCACC CGACATGGTG TTTGTCAACA CGACCGGAGT CGCCTCGGAC GTGCCCGGAA AACTGCGCTC CTGCGGATTG ACGCCCGGCA TGTTTTCGGC CTCTCTCGAA GAGCATCCGC TCGGAGCGTT CGAGTGGATC CGGTTCATGG GAGCGTTTTT CGACCGGGAC AGCCTTGCCG ATGCGCTTTT CAGGGAACGG GAGCGAGCCT ATCTGGACGT GCAGGCCAGG GCGGCGGCCG TGAAGCGCCG TCCTTCGCTC ATTGCCGGAT ACAGCAGAAA GGGAGCATGG TCGACCATGG GCTCTTCGCG ATGGTTTGCG ACCATGCTTG ACCATGCAGG AGCGGACTAC CTCTTCAAAG GCAAGCCATT CGAGCGGGGC CATCTCATCG GTCAGGAAGC AGGGCTCAGC GCAGGCATGT CGGCCGATTT CTGGGTGAAT ACGCATTTCA GGGCCCTCTC CATCGACGAT CTGACAGGCG AAGACTCCCG ATACGGGCTG TTCCGGAGCG TCCGCGAACG CAGGGTGTAC AACAACAACG GCAGTTGCTT CGCAAACGGC AGAAGCCGGT TCTGGGATAC GGGTATGACC GAACCCCATC TCATTCTGGC CGATCTTGTC AGCATTTTTC ACCCGGAACT GATGCCGGGT CACAAACTGA AGTATTACAG GCGGCTCGAT CGGAAGCCGT TGAATCAATG A
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Protein sequence | MKTFGFRYPG RSGSILLLFL LLLAACTPAG RQTGSRQQAD REAGEVRYAR LFTIARENGC TRITVAAADS ASRQDPFTYL LVPEEKPVPE DAGEAMVVRI PLKKVTCENG FQVSLLQMLG RSAALAGVSG KQRVGQDDVH RKIDSGELAV TGFMRGMNME RLLKTAPDMV FVNTTGVASD VPGKLRSCGL TPGMFSASLE EHPLGAFEWI RFMGAFFDRD SLADALFRER ERAYLDVQAR AAAVKRRPSL IAGYSRKGAW STMGSSRWFA TMLDHAGADY LFKGKPFERG HLIGQEAGLS AGMSADFWVN THFRALSIDD LTGEDSRYGL FRSVRERRVY NNNGSCFANG RSRFWDTGMT EPHLILADLV SIFHPELMPG HKLKYYRRLD RKPLNQ
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