| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1001 |
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| Symbol | |
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| ID | 6355450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 1092108 |
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| End bp | 1093994 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642668625 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001943056 |
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| Protein GI | 189346527 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.11298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAAA AAACAGTTGC GTTTCTTGCG GCTTGCATGG TATGCCAGAG TGCATTGTAC
GCAGGGGAAC CCTCCGAACG TTTTTACACT ACCGACGAGG TGGTGGTGAC GAGCAGCCAT
TTTTCCGAGA AGGAAAAGGA GAGCGCCAGG TTTATAACCG TTGCCGACAG CGAGAAACTC
AAAAAAACCG GGGCCACTAA CGCCATCGAA GCGCTTTCCC GAATCGGCGG TCTCGGGTAC
AAGTCCCTCG CTCCCCTTGG CGTCAACAAA CTCGGCATGA ACAGCTCGGT CTACATCAGG
GGGATGGCCG ACGGCGAGCT CATTCTTGTC AACGGCATGC CTGTCCAGCA GGCAGCTTCG
AAAGGGTATG ATCTCAGCGC CATTTCCATA GACCAGATCG AGAGAATCGA GGTACTCAAG
GGAGCCGCGT CCACGCTCTA TGGAGCCGAT GCGATGTCGG GCGTGATCAA TATCGTTACC
AAAAAACCTT CCGGCGAAAC ATCGGCGACC GCCTCGGTTG AATTCGGCAA CGAATCGTGG
ATGAACCACG GCGTCAGCGT CAACCTGCCC GGCGCGACTG TCGGTTTTCG TTACCAGCAC
ATGGACGAAC TCGACAATGT CGGCCGTCAG TTTACCAACA AGTACACCAA TGCCCTTGAC
GAGACCGACC GGTACATGTT CAATCTCAAC CTGTCGCCGT TTGCCGACAC CTATATCGAT
TATCAGTATT CCGGCTACGA AACGGGCTTC ATCGATCGTT ATGATTCGGG GCTGGTCGAA
CGGACGGATC AGCAGAGCGA CTTTCATTTT CTCAATGTTC GTTATGAAAG CGATGTGTTC
AAGGCAAAGC TGTACGGCGT TTACGACAAT CGCGTCCAGA CGGAGTACGT CGATGGGGTA
TTCGAGTCGG AGGTCGAGCG TCTGAATTAC AATTACGGCG CCGAGACCGA TTATCGTTTT
CTTTTTTCCC GCGGTCTCGA GCTGAGCGTG GGAGCGGACT ATGTTCATCG CTATGCCGAA
TATTCCAACA TCTACGGGGA AAAGTCGCGC GATGATTACG GCGTATTTGC GGAGTTGAAA
AAACGGTTCG GCGATGACCT TATCCTGACG TTCGGCGGGA GGGAGCAGTT CATCGACAAC
GAAGCGGAAA CGACCGATTA CAACGTATTT CTGCCAAGCG TCGGTCTTAT GTGGAAAGCT
TCGGATGATC TCAATCTGTT TGCCAATGCG GGCAAGGCTT TTCAGGCTCC GACCTTTACC
CAGCTGTACT ACGACAGCAA AACCATCAAA GGAAATCCCG ATCTCAAACC GGAATCGGGC
TGGAGTTACG AGACAGGGTT CAAGTGGAAC TGCGATTGCG CTTCGGCAAG GGTTTCCGGA
TTCTGGATGA CGTATGACGA CAAGATTCAG ATCGATCGCA AGAAAAAGCC TTACCGCTAT
TTCAATGCCG GCGCGTATGA AACGAAAGGC ATCGAATGGG AGCTCGGGCT GCGCCCGTTT
TATGGCGAAG CAGGGATTCT CGGCAGAGTC TCCCTATCGG CCGCAGGATA CTGGGCGGAT
CCTGTGTCGG AAGATATCTA CGGAGAAAAA TACCAGCCAG GTCCGAAGTT CCAGAATACC
TTCGGCATCA CGTATGCCTC GATACCGTTC GGTCTCGACC TGAGATGCCG GATACTTGCC
GGCCGTCAGG ACAATCTGGA CAACTATACC GCTTTCGATC TTTCCGGAAG GGTGAAAGCG
GGTCCCGGCA ATGTCACGGT CGCTGTTGAA AATCTGTTCG ATACCGAAAT CCAGACCTCC
GGCAATCTGG TTGAAACGGC AAGCAGCCGT TACGTCTATT ACGATCCGGG CCGTCTTCTC
CGGGTCGGAT ACGCGGTTGC ATTGTGA
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| Protein sequence | MTKKTVAFLA ACMVCQSALY AGEPSERFYT TDEVVVTSSH FSEKEKESAR FITVADSEKL
KKTGATNAIE ALSRIGGLGY KSLAPLGVNK LGMNSSVYIR GMADGELILV NGMPVQQAAS
KGYDLSAISI DQIERIEVLK GAASTLYGAD AMSGVINIVT KKPSGETSAT ASVEFGNESW
MNHGVSVNLP GATVGFRYQH MDELDNVGRQ FTNKYTNALD ETDRYMFNLN LSPFADTYID
YQYSGYETGF IDRYDSGLVE RTDQQSDFHF LNVRYESDVF KAKLYGVYDN RVQTEYVDGV
FESEVERLNY NYGAETDYRF LFSRGLELSV GADYVHRYAE YSNIYGEKSR DDYGVFAELK
KRFGDDLILT FGGREQFIDN EAETTDYNVF LPSVGLMWKA SDDLNLFANA GKAFQAPTFT
QLYYDSKTIK GNPDLKPESG WSYETGFKWN CDCASARVSG FWMTYDDKIQ IDRKKKPYRY
FNAGAYETKG IEWELGLRPF YGEAGILGRV SLSAAGYWAD PVSEDIYGEK YQPGPKFQNT
FGITYASIPF GLDLRCRILA GRQDNLDNYT AFDLSGRVKA GPGNVTVAVE NLFDTEIQTS
GNLVETASSR YVYYDPGRLL RVGYAVAL
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