Gene Clim_0853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0853 
Symbol 
ID6353925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp933883 
End bp935520 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content51% 
IMG OID642668478 
Productproton-translocating NADH-quinone oxidoreductase, chain M 
Protein accessionYP_001942911 
Protein GI189346382 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAGTC TTATCGTTTT TCTGCCTATT CTTGCCGGTC TGGTGATTCT TGCCGTGCCT 
TCGTCACAGA AGCAGATAAT CAGAATGGTG TCACTGCTTG CGGCAATCGC CCAGGGAGTG
CTCGCTGTAC TGATCTGGCA GGGGTATGAT GCCTCTCTGC CGGGAATCAC CGCTGCAGCA
GGAGGAGCCC CGGAAGGTTC CTTCCAGTTT ATCGAAAGAT TGCCGTGGAT CAATCTCGAC
CTCGGCACTA TGGGATCGCT CAACATCGAG TATTTCCTCG GTGTCGATGG TCTTTCGATA
ACCATGGTTA TTCTCACCGC ACTGATATCC ATCATCGGCG TTCTTTCCAG CTGGCCAATC
CAGAAACAGG TCAAAGGGTA CTTCATTCTC TTCAATCTGC TTTCCACCGC AATGATGGGC
TGCTTTGTCG CACTTGATTT CTTCCTGTTC TACGTGTTCT GGGAACTCAT GCTGCTTCCG
ATGTATTTTC TTATCGGTAT CTGGGGTGGT CCTAACAGGG AATACGCTGC AATCAAGTTT
TTCCTGTATA CGCTTTTCGG TTCCGTGTTC ATGCTTCTGG TCATGATCGG TCTCTATTTC
AGTGTTACCG ATCCGGTTAC CGGCAACCAC ACGTTCAGTC TTGTGGCCAT GGCAAGCCAG
GAGAACTATA TCAAGGATGC CATTCTCGGT CCAGACAATG TCATGTGGCG TTATGCGGCT
TTCATTGTGC TCTTTATCGG ATTTGCCATA AAGGTTCCGA TGTTTCCGTT CCATACCTGG
CTTCCCGATG CTCACGTCGA GGCTCCAACC CCAATCTCGG TCATTCTTGC CGGCGTACTG
CTGAAACTGG GTACCTATGG CATGATGCGT ATCAACTTCC CGCTTTTTCC TGAAGTATTC
CAGGCTTCGC TCTATGTGAT TGCCGTTCTT GGTGCCATCA ATATCATCTA CGGTGCATTC
TGCGCGCTTG CACAGCAGGA TCTCAAAAAG ATGGTTGCCT ATTCATCGAT CAGTCATATG
GGTTATGTGC TGCTCGGTCT CGCTGCTGCA AACACCGAAG GCATGGTGGG TGCTCTTTAT
CAGATGTTCA ACCATGGCAC CATTACGGCC ATGCTCTTCC TTCTCGTCGG CGTGATCTAC
GACCGTGCAC ATACCCGTCA GATCGACAAG TTCGGCGGCC TTGCTTCGTA TATGCCTGTT
TATGCGGCAG TCGTTACTAT CGCCTGGTTT GCTTCGCTCG GTCTTCCCGG TCTCAGCGGT
TTTATCTCCG AAGCGTTTGT CTTTGTTGGC GCATTCAGCT CCGAGACCAC CCGTAATGTC
GCCATCGTTT CAGTACTCGG TATTGTGTTT GGTGCCGCCT ATCTGCTCTG GTCACTTCAG
AGGATGTTTC TCGGAAAGAG AAAGCCGGAT GCAGCCTACG ATCTTGAAGT CGGAGCCGAC
GGCCATGAAC ACATCCATTT TCACGACTGG AAAGGGAAAC TCGATCTCGA TGCGCGTGAG
CTTGTCATGC TGGTGCCGCT TGCCGTTATC GTCATTTTCC TCGGTATTTA CCCGATGCCG
GTACTCGGCA TGCTGACCTC AAGCATCAAC AAGCTGGTTG AGGTGCTTTC GCCTGTAGTT
ATGACTGCGT TGAATTAA
 
Protein sequence
MLSLIVFLPI LAGLVILAVP SSQKQIIRMV SLLAAIAQGV LAVLIWQGYD ASLPGITAAA 
GGAPEGSFQF IERLPWINLD LGTMGSLNIE YFLGVDGLSI TMVILTALIS IIGVLSSWPI
QKQVKGYFIL FNLLSTAMMG CFVALDFFLF YVFWELMLLP MYFLIGIWGG PNREYAAIKF
FLYTLFGSVF MLLVMIGLYF SVTDPVTGNH TFSLVAMASQ ENYIKDAILG PDNVMWRYAA
FIVLFIGFAI KVPMFPFHTW LPDAHVEAPT PISVILAGVL LKLGTYGMMR INFPLFPEVF
QASLYVIAVL GAINIIYGAF CALAQQDLKK MVAYSSISHM GYVLLGLAAA NTEGMVGALY
QMFNHGTITA MLFLLVGVIY DRAHTRQIDK FGGLASYMPV YAAVVTIAWF ASLGLPGLSG
FISEAFVFVG AFSSETTRNV AIVSVLGIVF GAAYLLWSLQ RMFLGKRKPD AAYDLEVGAD
GHEHIHFHDW KGKLDLDARE LVMLVPLAVI VIFLGIYPMP VLGMLTSSIN KLVEVLSPVV
MTALN