Gene Clim_0837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0837 
Symbol 
ID6353907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp920076 
End bp921464 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content53% 
IMG OID642668460 
Productouter membrane efflux protein 
Protein accessionYP_001942895 
Protein GI189346366 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGGT TTGTACTGCC GGTTCTTGCT GTTTTCTTTT TTTTCGTACC AGCGGTTATC 
GAGTCCGCTC CGGTCGCCGC CGTTGGTGAT AGCGGCAGAT ATGTTCTTAC GCTTGACGAT
GCCGTCCATC TTGGCTTGAG CAGGAGCCGC TCGCTTGAAA TTGCCCGTCT CGATCGTGAG
ATGGCCGGGC AGAAAATCAG GGAGACCTGG GCAGATGTCC TGCCCCAGAT TTCCACCAGT
TTTACCTACA CCCGTTCGCT GAAGCCGACG GTACTTTTTT TCCCGAATGT TTTTTCCGGA
GGGGATCCCA CTCAGTTCAC TCCTCTTGAA ATCAGCGCGG ACAATTCTGC ATCGGTAACG
CTCGATTTGC GGCAGAAGAT TTTTGATGGA GCGGCCATTG CCGGCATCAG GGCAGCTTCG
GTTGTACGTA AAATAAGCAG CGAGGCCTAT CGGAACACCG AGTCTGCGGT TGTTGCCGGA
ATTAAGCAGG CTTATTTCGA TGCATTGATT TCCAGAGACC GCCTTAAGCT CATCCGCCAG
AGCATCGAGC GCTGGGAGCT TGCCCAAAAG GATACGCGGG CGATGTTCCG CCAGGGAGTT
GCTGCCGATA TCGATACTTT GCAGGCCTTT CTGTCGGTTG AAAACCTTCG TCCCGATCTG
ATACAGGCAG AGAATATGGT AGGTATAAGT ATGACGAAGC TGAAGAACGC TATGGGTGTC
GCTGCGGAAA GTGACGTGAC GCTTTCAGGA CGGCTTGAGG TTTCGCCTGC ATCCTATCCG
GCCGATATAG CTTCAGCATA CCGTGAGGCA CTTGAATCGA GGCCGGATCT CAGGCAGCTC
GAACTTCAGG TCGAGGCCGA GGATGAAAAG GTCTTTTCCG CACGGTCGGA ACGATTTCCT
GTTTTGTCGG CCTTTGGCCA GCTTGAAACC CAGACGGCAT TCAGCGACGA TGTAAGTCTT
GCCGATTCGA ACTGGCCAGT CTCCTCTTCA GTAGGTCTGC AGGTGAGTAT GCCGATTTTT
ACCGGGTTCA GGATCAGCGC TCGCGTGGAG CAGGCCAGGA TAGCCCGTTT GCAGGTCATT
GCCCGTTATG CGGATCTCAA GGCGAACATC AGAACCGAGG TTGAGGTGAG TCTTTCGGCC
TTCCGGGAAG CTCAGAAGCG AATTGAAGTG CAGTCGAAAA CCATCAGCGT TGCTGAACGC
AGTTACCGGA TTTCCCAGCT CCGGTTTCGC GAAGGTATCG GTTCGCGCCT TGAACTGAGC
GACGCGGAAC TGCAGCTGAA CAAGGCTAAA ACCAACTATC TTCAGTCGGT ATATGATTAT
ATGATGGCCA GCGTGCAGCT TGACAGGACA TTGGGGCGTT CAGGAGTGAT GGTTCCGGTC
AAAGGTTAA
 
Protein sequence
MKRFVLPVLA VFFFFVPAVI ESAPVAAVGD SGRYVLTLDD AVHLGLSRSR SLEIARLDRE 
MAGQKIRETW ADVLPQISTS FTYTRSLKPT VLFFPNVFSG GDPTQFTPLE ISADNSASVT
LDLRQKIFDG AAIAGIRAAS VVRKISSEAY RNTESAVVAG IKQAYFDALI SRDRLKLIRQ
SIERWELAQK DTRAMFRQGV AADIDTLQAF LSVENLRPDL IQAENMVGIS MTKLKNAMGV
AAESDVTLSG RLEVSPASYP ADIASAYREA LESRPDLRQL ELQVEAEDEK VFSARSERFP
VLSAFGQLET QTAFSDDVSL ADSNWPVSSS VGLQVSMPIF TGFRISARVE QARIARLQVI
ARYADLKANI RTEVEVSLSA FREAQKRIEV QSKTISVAER SYRISQLRFR EGIGSRLELS
DAELQLNKAK TNYLQSVYDY MMASVQLDRT LGRSGVMVPV KG