Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0837 |
Symbol | |
ID | 6353907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 920076 |
End bp | 921464 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642668460 |
Product | outer membrane efflux protein |
Protein accession | YP_001942895 |
Protein GI | 189346366 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGGT TTGTACTGCC GGTTCTTGCT GTTTTCTTTT TTTTCGTACC AGCGGTTATC GAGTCCGCTC CGGTCGCCGC CGTTGGTGAT AGCGGCAGAT ATGTTCTTAC GCTTGACGAT GCCGTCCATC TTGGCTTGAG CAGGAGCCGC TCGCTTGAAA TTGCCCGTCT CGATCGTGAG ATGGCCGGGC AGAAAATCAG GGAGACCTGG GCAGATGTCC TGCCCCAGAT TTCCACCAGT TTTACCTACA CCCGTTCGCT GAAGCCGACG GTACTTTTTT TCCCGAATGT TTTTTCCGGA GGGGATCCCA CTCAGTTCAC TCCTCTTGAA ATCAGCGCGG ACAATTCTGC ATCGGTAACG CTCGATTTGC GGCAGAAGAT TTTTGATGGA GCGGCCATTG CCGGCATCAG GGCAGCTTCG GTTGTACGTA AAATAAGCAG CGAGGCCTAT CGGAACACCG AGTCTGCGGT TGTTGCCGGA ATTAAGCAGG CTTATTTCGA TGCATTGATT TCCAGAGACC GCCTTAAGCT CATCCGCCAG AGCATCGAGC GCTGGGAGCT TGCCCAAAAG GATACGCGGG CGATGTTCCG CCAGGGAGTT GCTGCCGATA TCGATACTTT GCAGGCCTTT CTGTCGGTTG AAAACCTTCG TCCCGATCTG ATACAGGCAG AGAATATGGT AGGTATAAGT ATGACGAAGC TGAAGAACGC TATGGGTGTC GCTGCGGAAA GTGACGTGAC GCTTTCAGGA CGGCTTGAGG TTTCGCCTGC ATCCTATCCG GCCGATATAG CTTCAGCATA CCGTGAGGCA CTTGAATCGA GGCCGGATCT CAGGCAGCTC GAACTTCAGG TCGAGGCCGA GGATGAAAAG GTCTTTTCCG CACGGTCGGA ACGATTTCCT GTTTTGTCGG CCTTTGGCCA GCTTGAAACC CAGACGGCAT TCAGCGACGA TGTAAGTCTT GCCGATTCGA ACTGGCCAGT CTCCTCTTCA GTAGGTCTGC AGGTGAGTAT GCCGATTTTT ACCGGGTTCA GGATCAGCGC TCGCGTGGAG CAGGCCAGGA TAGCCCGTTT GCAGGTCATT GCCCGTTATG CGGATCTCAA GGCGAACATC AGAACCGAGG TTGAGGTGAG TCTTTCGGCC TTCCGGGAAG CTCAGAAGCG AATTGAAGTG CAGTCGAAAA CCATCAGCGT TGCTGAACGC AGTTACCGGA TTTCCCAGCT CCGGTTTCGC GAAGGTATCG GTTCGCGCCT TGAACTGAGC GACGCGGAAC TGCAGCTGAA CAAGGCTAAA ACCAACTATC TTCAGTCGGT ATATGATTAT ATGATGGCCA GCGTGCAGCT TGACAGGACA TTGGGGCGTT CAGGAGTGAT GGTTCCGGTC AAAGGTTAA
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Protein sequence | MKRFVLPVLA VFFFFVPAVI ESAPVAAVGD SGRYVLTLDD AVHLGLSRSR SLEIARLDRE MAGQKIRETW ADVLPQISTS FTYTRSLKPT VLFFPNVFSG GDPTQFTPLE ISADNSASVT LDLRQKIFDG AAIAGIRAAS VVRKISSEAY RNTESAVVAG IKQAYFDALI SRDRLKLIRQ SIERWELAQK DTRAMFRQGV AADIDTLQAF LSVENLRPDL IQAENMVGIS MTKLKNAMGV AAESDVTLSG RLEVSPASYP ADIASAYREA LESRPDLRQL ELQVEAEDEK VFSARSERFP VLSAFGQLET QTAFSDDVSL ADSNWPVSSS VGLQVSMPIF TGFRISARVE QARIARLQVI ARYADLKANI RTEVEVSLSA FREAQKRIEV QSKTISVAER SYRISQLRFR EGIGSRLELS DAELQLNKAK TNYLQSVYDY MMASVQLDRT LGRSGVMVPV KG
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