| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0811 |
|---|
| Symbol | |
|---|
| ID | 6353881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 888723 |
|---|
| End bp | 891086 |
|---|
| Gene Length | 2364 bp |
|---|
| Protein Length | 787 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642668435 |
|---|
| Product | Kojibiose phosphorylase |
|---|
| Protein accession | YP_001942870 |
|---|
| Protein GI | 189346341 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1554] Trehalose and maltose hydrolases (possible phosphorylases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.427192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACCGAA CTGAATCGAA CGGGTTTGCC GGCACGGGAC TGTCGCACGC CTCACTTCTT
GGGCTTTCCG CAGATGCGTG GCTCATGCGG CGCAAAGGGT TCCGAAGAAC CGCAAACAGT
ATCCAGATCG CCGAATCGCT CTTTACGATA GGCAATGGAT ATCTCAACAT CAGGGGAAGT
CTTGAAGAGC TTCCTGACGG TCATTCCGGA GGAATGTATC TCGGCGGCGT TTATGACCGG
TCGGAAGCCG ATGTCGAAGA GCTGGTGAAG TGTCCTATGT GGACCGATGT TTCCGTCTGG
AGCGAAAGCG AGAAGTTCAG CCTGTCAACC TGCACCCTGC TGTTTCACGA GCAGGTGCTC
GACATGAAAA AAGGGATTCT GCACCGTTCG ACCACCATGC GGAACTCCAC CGGCAGAATT
CTTACCATAG AGAGCCTCCG TCTGGTAAAC ATGCATCACG TTCATTTTGG TTATATGCTT
TTCAGGATAA CCCCGAGAAA TTTTTCAGCT CCCCTGCGTG TATTCAGCGG TCTTAACGGA
GATGTATGCA ACCGTGGTTT TTTCCCCGAA GAGCGCATCA AGCACCTGCA GCTTGAAAAG
ATCGAGCGGG GCCGGAATTT CATGTACCTC GAAATGAAAA CCCGGCAGCA GGGTATACGG
ATAGCTGAGG CCGCTTCGTG GAAGCTGATA CTGCCCAAAT CCGCACGGGC AAATCCCGAA
CCGAGAATTT ACGGCGAGAA ATTCACCAGC GAGATGACCC TCGACGTCGA GAAGGGCCAG
TCCTATACGT TCGAAAAACT TGCCGTGGTG CATACCAGCC GGGAAATACC CGAAGAGAGC
ATGTTCAGCC GCTCGATATG CGAGCTGAAA AAATATGTCC GTATAGGAGC CGATGTCCAT
CTTGCTTCTC ATCTTCAGGC ATGGGGGGAG AAATGGAAGC AGGCCGACAT CCGGATATCG
GGAGACCCTC ATGCCCAGGG GGCGTTGCGT TACAACATCT ACCAGTTGCT GATCAATGGA
CCTCCGGTTT CAGGCAGCAT CGGAGCGAAG TTCCTCAGTT CGGAGGGTTA CCTCGGCCAT
GTGTTCTGGG ATACCGAGAT TTTCATTCTG CCTTTCTTTA TCTACAATTT TCCGGAAATA
GCGCGCAACA TGCTGCACTA CCGGTTTGCG ACGCTGCCGG GTGCGAAGAG AAACGCAGAA
AGGAACGGCT ACCGGGGAGC GAAATATGCA TGGGAGTCCG CATCCACAGG TGAGGACGTG
ACTCCGAGAT TTGCTTCGAA ACTTGAGCGC ACCATTCGGC TTATCTATAC CGGTATAGAG
GAGGATCATA TCGTTTCGGA TGTCATATAT GGCCTCGAGA GATATTTCCG GGTAACCGGT
GACGAGGAGT TTCTTTTTGA GTGCGGGCTT GAAATGGTTT TTCAGACGGC AAGATTCTGG
GCAAGCCGGG TGGTATTCAG CGAGGGAATC TATGAGATAC GCCGGGTTAT CGGCCCCGAC
GAATTTCATG AACATGTCGA CAATAACGCC TATACGAACT ACATGGTGAA ATGGCATCTT
CGGCTTGCCT GCATGCTTTT TACCTACATG ACGAAACGAC ACCTCGACCG GTTCGAGCCT
CTTTGCCGCA AAATTGAACT TGTCGAAGAA GAGGTTGCCG AGTGGCTTTC GGTGAGCAGG
TCTCTGAAAT TTTCCATCGA TCCCGAGACC ATGCTTGTTG AGCAGTTCGA CGGTTATTTC
AGGCTCCGCG ACTACGTTAT CGAAGGGTTC GACCGTAAAG GGCACCCGAA GCTGCCCAGA
GGAGTCACCT ACAGGAATAT CGGATCGACG ACGCTCATCA AGCAGGCCGA CGTGCTGCTG
CTGATGCACC TGTTTCCCCA TGCGTTCAGC CAGGATGCAA AGCAGGCGAA TTATGATTAC
TACGAAAAGC GTACCGCGCA CAAGTCATCC TTAAGTCACT GTACGCATGC AATGATGGGT
CTGTCGGTCG GAAAACGATC CAGAGCTTAC CACTACTTTA TGAAAACCGC TCTTTTCGAT
CTTGAAAATC TACACGGAAA TACAGCCATG GGCATTCATG CCGCTGCGGT AGGCGGCGCC
TGGCAGACCG TCGTATACGG GTTCGGAGGG CTGTCGATAA AATCGGACCG GCTGGTGCTG
AAGCCCTGGC TGCCGGGGAA GTGGACGTGT CTCTCTTTTT CCGTTCGGTG GCAGGATCGG
AGTATTGACC TTGCTATCTA TCACGACAGG ATTTCCATAT GTATAGCGGC TCCCTATGAC
GGAGAAATTC CGGTGAGTCT CTATCATAAA ACGCATAAAA TCAGGACAAA CAGGAAAGAG
GTGCTGCACT ATTGTTCATC GTGA
|
|---|
| Protein sequence | MYRTESNGFA GTGLSHASLL GLSADAWLMR RKGFRRTANS IQIAESLFTI GNGYLNIRGS
LEELPDGHSG GMYLGGVYDR SEADVEELVK CPMWTDVSVW SESEKFSLST CTLLFHEQVL
DMKKGILHRS TTMRNSTGRI LTIESLRLVN MHHVHFGYML FRITPRNFSA PLRVFSGLNG
DVCNRGFFPE ERIKHLQLEK IERGRNFMYL EMKTRQQGIR IAEAASWKLI LPKSARANPE
PRIYGEKFTS EMTLDVEKGQ SYTFEKLAVV HTSREIPEES MFSRSICELK KYVRIGADVH
LASHLQAWGE KWKQADIRIS GDPHAQGALR YNIYQLLING PPVSGSIGAK FLSSEGYLGH
VFWDTEIFIL PFFIYNFPEI ARNMLHYRFA TLPGAKRNAE RNGYRGAKYA WESASTGEDV
TPRFASKLER TIRLIYTGIE EDHIVSDVIY GLERYFRVTG DEEFLFECGL EMVFQTARFW
ASRVVFSEGI YEIRRVIGPD EFHEHVDNNA YTNYMVKWHL RLACMLFTYM TKRHLDRFEP
LCRKIELVEE EVAEWLSVSR SLKFSIDPET MLVEQFDGYF RLRDYVIEGF DRKGHPKLPR
GVTYRNIGST TLIKQADVLL LMHLFPHAFS QDAKQANYDY YEKRTAHKSS LSHCTHAMMG
LSVGKRSRAY HYFMKTALFD LENLHGNTAM GIHAAAVGGA WQTVVYGFGG LSIKSDRLVL
KPWLPGKWTC LSFSVRWQDR SIDLAIYHDR ISICIAAPYD GEIPVSLYHK THKIRTNRKE
VLHYCSS
|
|---|
| |