Gene Clim_0622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0622 
Symbol 
ID6354070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp701120 
End bp702010 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content55% 
IMG OID642668253 
Productdihydrodipicolinate synthase 
Protein accessionYP_001942688 
Protein GI189346159 
COG category[M] Cell wall/membrane/envelope biogenesis
[E] Amino acid transport and metabolism 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.260695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACAC GACTCATTTC AGGCTCCGCC GTCGCTCTCG TTACTCCGTT CAGGCAGGAC 
TGCTCTGTCG ATACCGTTGC ATTACGACAA CTGGTACGGT TTCACATTGC AGCCGGAACC
GATATTATCA TCCCCTGCGG AACAACCGGG GAATCGCCGA CACTCTCTAT GGAGGAGCAG
TCACGCATCA TCCGTACGGT AAAAGAGGAA GCCGGCGAAC AGATCATGGT TGCGGCAGGA
GCCGGAACCA ACGCCACGGA CCATGCGGTC GAGTTGGCGA AAAATGCAGA AAAAGCCGGG
GCTTCGGCCA TACTCTCTGT CGCACCCTAC TATAACAAGC CTTCCCAGGA AGGCATCTAT
CAGCACTACG CCCGCATTGC CGAAGCAGTC TCCGTTCCGA TTATCATCTA CAACGTTCCC
GGCAGGACGG GCAGCAATGT GGCGGCATCG ACGATTCTCA GGCTTGCCCG TGATTTCGGC
AACATCGCGG CAGTCAAGGA GGCTTCGGAT AACATGGCCC AGATAACGGA ACTTCTCGAA
GAAAGACCTG AGAACTTTTC CGTACTGACC GGCGAGGATA TGCTTATTCT TCCGTTCATG
GCGATGGGAG GAGACGGAGT TATTTCCGTA GCGGCGAACC AGGTGCCGTC GGCAGTCAAG
CGTTTGGTCG AAGCTGCCCG CACCGGACGT CTTGACGAAG CCCGCGCGAT CAACACCCGA
TACCGTCGGC TCTTCAGGCT TAACTTTATT GAAAGCAATC CGGTACCGGT TAAGTACGCG
CTGGCCCTGA TGGGTATGAT CGAAGAGGTC TATCGGCTTC CGCTTGTTCC ACTGGCGGAT
GAAAACAAGC GCATCCTGAA AGAGGAGCTT CAGAGCCTCG GGCTTGTGTA A
 
Protein sequence
MSTRLISGSA VALVTPFRQD CSVDTVALRQ LVRFHIAAGT DIIIPCGTTG ESPTLSMEEQ 
SRIIRTVKEE AGEQIMVAAG AGTNATDHAV ELAKNAEKAG ASAILSVAPY YNKPSQEGIY
QHYARIAEAV SVPIIIYNVP GRTGSNVAAS TILRLARDFG NIAAVKEASD NMAQITELLE
ERPENFSVLT GEDMLILPFM AMGGDGVISV AANQVPSAVK RLVEAARTGR LDEARAINTR
YRRLFRLNFI ESNPVPVKYA LALMGMIEEV YRLPLVPLAD ENKRILKEEL QSLGLV