Gene Clim_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0559 
Symbol 
ID6354910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp632970 
End bp634373 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content53% 
IMG OID642668195 
Productbifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase 
Protein accessionYP_001942630 
Protein GI189346101 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase 
TIGRFAM ID[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ
[TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.542245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTATTC ACCAGCGCAC CCTGCAACAA GAAGTCTCGC TACAGGGCTC GGGACTGCAT 
ACCGGAAAGG AATGCATCAT CACCTTCAAA CCGGCTCCTG TCAATTACGG ATACCGTTTT
ATACGTACCG ACCTTGAAGA CCAGCCTGAA ATTCCCGCCC TGATTGAAAA CGTCGTCGAT
GTCCTCAGGG GGACAACCAT TGCCGTCAAC GACGTGAAAA TTCATACGAC CGAACATGTT
CTTGCCGCCC TTTACGGACT GCAGATCGAC AATTGCCGGA TTGAAATGAG CGGTCCCGAA
CCTCCGGTCA TGGACGGAAG TTCGCTGCCG TTTGCAGAAC GGCTTCTGAG CGCCGGAATC
GTCGAGCAGG ATGAACCGAA AAACTATCTG GTCATCGATG AAACCGTAGA ATATCACGAC
ACGAAAAACA GCGTCGATAT TGTTGCCCTG CCGCTGGACA GCTTCAGGGT GACGGTTATG
GTCGATTATA AAAATCCCGC TCTCGGCTCG CAGCATTCCG GACTTTTCGA TCTCCAGAAA
GAGTTCATGC AGGACTTCGC GCCATGCCGG ACATTCTGTT TTCTGAGCGA AGTGGAAGCG
CTGGCAAATC AGGGAATCAT CAAGGGCGGA GATATCGACA ACGCGGTCGT CATTGTCGAT
AAAACCATGC AGAAAGATGA ACTCGAAGCG CTTGCCGAAA AACTCGGCAT TGGAAGCGCC
AAACTCACAA CCGGAGAAAA CGGCATACTG AACAACCGGG AACTGCGCTT CACCAATGAA
CCGGCACGGC ACAAGCTGCT TGACCTGCTC GGCGACATAG CCCTTCTCGG CATGCCGATC
AAGGCCCAGG TTCTCGCCGC AAGACCGGGA CATGCATCAA ACGTGGAATT TGTCAAACAG
CTGAAAAAGT ATGCCGATCG CAATAAACTC GCCCGGCAGT TTCAGCATGA GAAAAAGGCC
GGGGTTGTTT TCGATATCAA TGCCATTCAG AACATCCTGC CCCACCGCTA TCCGTTCCTC
CTGATCGACA AGATCGTCGA GTTCAAGCTC GACGAAAAGA TCGTGTCCAT CAAGAATGTC
ACCATGAACG AGCCCTTCTT TCAGGGGCAC TTCCCCGGCA ATCCGATCAT GCCGGGCGTT
CTGATACTCG AAGCCATGGC CCAGACAGGC GGCATCATGA TGCTGAACGG CAACGAAAAC
ATCAAGGAGA GCGTGGTGTA CTTCATGGGC ATCGACAAGG CCCGCTTCCG CAAACCGGTT
CTGCCCGGCG ACACGCTTGT CATCGAAGCC GTCATGACCA ACAAACGCAG AACCGTCTGC
CAGTTCGACG CAAAAGCCTT TGTCAGGGGC GAACTGGTCT GCGAAGCCTC GCTTATGGCT
ACCGTAGTAT CGAAAAACAA GTAA
 
Protein sequence
MLIHQRTLQQ EVSLQGSGLH TGKECIITFK PAPVNYGYRF IRTDLEDQPE IPALIENVVD 
VLRGTTIAVN DVKIHTTEHV LAALYGLQID NCRIEMSGPE PPVMDGSSLP FAERLLSAGI
VEQDEPKNYL VIDETVEYHD TKNSVDIVAL PLDSFRVTVM VDYKNPALGS QHSGLFDLQK
EFMQDFAPCR TFCFLSEVEA LANQGIIKGG DIDNAVVIVD KTMQKDELEA LAEKLGIGSA
KLTTGENGIL NNRELRFTNE PARHKLLDLL GDIALLGMPI KAQVLAARPG HASNVEFVKQ
LKKYADRNKL ARQFQHEKKA GVVFDINAIQ NILPHRYPFL LIDKIVEFKL DEKIVSIKNV
TMNEPFFQGH FPGNPIMPGV LILEAMAQTG GIMMLNGNEN IKESVVYFMG IDKARFRKPV
LPGDTLVIEA VMTNKRRTVC QFDAKAFVRG ELVCEASLMA TVVSKNK