| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0539 |
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| Symbol | |
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| ID | 6354890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 606817 |
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| End bp | 610257 |
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| Gene Length | 3441 bp |
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| Protein Length | 1146 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642668175 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001942610 |
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| Protein GI | 189346081 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.413657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACCT CTCCTGGAGA GAATGTCTAT GACCGTTTCG AGTATACCCT CCGTTCATCC
GTGCTGCGCA ATACCGATGG CTCGAAGGTG TTTGAGATGA ACGATATCGA AGTGCCGAAA
CACTGGTCGC AGGTTGCTGC CGATATTCTT GCCCAGAAAT ATTTTCGCAA GACAGGGGTT
CCCAGGCGCG ATGCGGAAGG CAAGGTACTG CTCGATGAAC ATGGCCGCCC GGTAACCGGC
AGTGAACGCT CCATCAAGGA GGTGGTGCAT CGTTTGGCAG GGTGCTGGAG GGAGTGGGGC
GAAAACAACC GCTACTTCGA CACTCCTGAC GACGCCCGGG CCTTTTACGA TGAGGTCGCA
TACATGCTGC TTCGTCAGAT GGGTGCTCCG AACTCGCCGC AATGGTTTAA CACCGGACTG
AACTTCGCTT ACGGTATTGA CGGTCCCGCC CAGGGGCATT TCTATGTAGA TCCGGCAACA
CAGGAGGTGC GTGAGTCTGA AGACGCTTAT TCCCGTCCGC AGGCACACGC CTGTTTCATT
CAGTCGGTCA ATGACGATCT GGTCAACGAA GGCGGCATAT TTGATCTTGC CGTTCGCGAA
GCAAGGGTTT TCAAGTTCGG CAGCGGATCG GGCACAAACT ATTCGAATCT TCGGTCATCC
GGTGAAAAAC TCAGCGGTGG CGGGAGTTCA TCGGGATTGA TGAGTTTTCT CAAAATTTTC
GATTCGGCGG CAGGAGCCAT CAAATCGGGA GGAACGACTC GCCGTGCCGC TAAAATGGTT
ATTGTCGATA TCGATCATCC GGACGTCGAG AGATTTATCG AGTGGAAAGC ACGGGAAGAG
GACAAGGTTG CCGCGCTGGT CGCCGGTTCG AGAATCTGTT CCCGCTTTCT GAAAGCTATT
GTCGATGAAG CCATTGCCAA CGGTTCCGAT CGTTCCGAAA ATCTGAACCT CCAGCTGCTC
ATCAAAAATG CCCTTGCCAG AGCCGTGCCC ATGAATTATA TCGTCAGGGT GCTTGCCCTG
GTCGATCAGG GCTATACCAC GCTTGACTTC GAAGAGTATG ATACCCATTA CGAATCCGAA
GCGTACCAGA CTGTCGGCGG CCAGAATTCG AACAATACGG TCAGGGTCAC CAACGCCTTC
ATGAAAGCGG TCGAGAACGA CGACATGTGG GCGCTTCGCG AGCGTACCAC CGATAAAACG
GCAAGGGCGG TAAGAGCTCG CGATCTCTGG GAAAAAGTTC TCATGAGCGC ATGGAAGTGC
GCCGATCCCG GTCTCCAGTT CGACACCACC ATCAACGAGT GGCACACCTG TCCGCAGAGC
GGAAGGATCA ACGCCAGCAA CCCCTGCAGC GAGTACATGT TCCTCGACGA CACCGCCTGT
AATCTGGCCA GCCTCAACCT GATTCACTTC GTCGATGAAT CGACCGGAAA GATCAGGGTC
AGGGAGCTGC TGCACGCTTC GGCGCTCTGG ACCGTGGTGC TGGAGATATC GGTGCTGATG
GCGCATTTCC CATCGAAGGA TATCGCCCGC CTCAGCTACG AGTACCGCAC GCTCGGTCTT
GGCTTTGCCA ATCTCGGCAC GGTGCTTATG GTGCTCGGCA TTCCTTACGA TTCGCCAAAA
GCACTTGCGC TTGCCGGTGC GATTTCAGCG CTTATGACCG GTCAGGCTTA TGTCACCTCT
GCGGAAATGG CAAAAGACCT CGGCGCGTTT GCCGGCTATG CGGCCAACTC CAAAGATATG
CTGCGTGTGA TCCGCAACCA TCGTCGTGCG GCCCATAATC TTTCCGAAGA GGAGTACGAA
GGACTTAGCG TCAAGCCTCG CGGGATCGAC TCGGAATACT GTCCGACAGA GCTTTTTGAA
GCTGCCGGAA AAATCTGGGA CGAGGCTCTG CAGAAGGGCA AGAAACACGG GTTTCGCAAC
GCGCAGGTCA GCGTTATCGC TCCTACCGGC ACCATCGGTC TCGTTATGGA CTGCGACACT
ACCGGCGTCG AACCTGAATT CGCCATTGTC AAGTTCAAGA AACTTGCCGG AGGCGGCTAT
TTCAAAATCG TCAACCAGTC GGTGCACAAA GCGCTTGAAA GGCTTGGCTA TACCAGTGCA
CAGATAGACG ATATCGAAAA GTACTGCAAG GGTCACGGAA CGCTTTCCGG ATGCCCGACC
ATCAGCCGCC AGTGGCTGAA GAGCAGGGGA TTCACCGACG AGAAGATCGA GCAGGTCGAG
TTGCAGCTTG AAACCGTTTT CGATATCCGG TTCGCTTTCA ATAAATGGAT TCTCGGTGAG
GAGTTCTGTC TTTCGCTGGG CTTTACCGAT GAACAGCTCA ACAGCCCTGA TTTCGATATG
CTGCAGGCGC TCGGAGCTAC CGGTCAGGAT GCCGAAGCCG CCAATGACTA CATCTGCGGC
ACCATGACCA TCGAAGGTGC GCCTCATCTG AAGCATGAAC ACCTGCCGGT GTTCGATTGC
GCAAGCCGCT GCGGCAAAAA AGGTGAACGA TATATCACGC ATATGGCACA TGTCCATATG
ATGTCCGCCG TCCAACCGTT TATTTCGGGT GCGATTTCGA AAACCGTCAA TATGCCCGGA
ACGGCTACAA CAGTTGAAAT AGGGGATGTA TATCGCTCCG CCTGGCAGCA CATGGTCAAG
GCGATAACCA TCTATCGTGA CGGATCGAAA CTGTCGCAGC CGCTCAATAT TTCAAGCTAC
AGGGATCTTG ACGAGATCAT CATGCTCGGC ACCGAGGAGA CGCTCGACGA AACGAAAGGA
CCTCGAGAGG TTCAGGAGCG CATTATCGAA CGGGTTTTTC ACCGTTCCGA GCGCAGACTT
CTTCCGAAAA GACGCAAGGG GTATATCCGT GAAGCCTATG TGGGAGGACA CAAGGTGTTT
CTTCGTACCG GAGAGTATGA AGATGGATCG CTCGGAGAGG TTTTTATTGA TATGTACAAA
GAGGGGGCTT CCTTCAAGGG ACTGTTGAAC TGTTTTGCCG TGCTTGCCTC GAAAGCCCTG
CAGTACGGCA TGCCGCTCGA GGAGCTTGTG GACAGCTTTA CCTTTACCCG CTTTGAGCCA
GCCGGAACCG TGCAGGGTCA CAATGCCATC AAAAACTCCA CCTCGATTCT CGATTACGTG
TTTCGTTCGA TCGGTTACGA CTATCTCGGC CGCAAGGATT TCGTCCATGT AAAGGCCGTC
GATGAAGTTC CTGAGGGCGG AGATATTGAA GAAAAAGCAA AAAATAACGG TTCAGCCGTT
CATGAACCGC AACTGTCGCA TGCTGCCGGA CAGCAGCATG TGACGTCGGA GTACGCAGCG
AGTCTGAAAA CTCAGGTTTT GCAGGCCAAG GTTCAGGGTT ACACCGGGGA GCAGTGCGAA
AACTGCGGTT CGATGCGGGT GAAGCAGAAC GGTACCTGCA AGGTTTGTGA GGATTGCGGG
ACAACGACCG GTTGTTCCTG A
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| Protein sequence | MFTSPGENVY DRFEYTLRSS VLRNTDGSKV FEMNDIEVPK HWSQVAADIL AQKYFRKTGV
PRRDAEGKVL LDEHGRPVTG SERSIKEVVH RLAGCWREWG ENNRYFDTPD DARAFYDEVA
YMLLRQMGAP NSPQWFNTGL NFAYGIDGPA QGHFYVDPAT QEVRESEDAY SRPQAHACFI
QSVNDDLVNE GGIFDLAVRE ARVFKFGSGS GTNYSNLRSS GEKLSGGGSS SGLMSFLKIF
DSAAGAIKSG GTTRRAAKMV IVDIDHPDVE RFIEWKAREE DKVAALVAGS RICSRFLKAI
VDEAIANGSD RSENLNLQLL IKNALARAVP MNYIVRVLAL VDQGYTTLDF EEYDTHYESE
AYQTVGGQNS NNTVRVTNAF MKAVENDDMW ALRERTTDKT ARAVRARDLW EKVLMSAWKC
ADPGLQFDTT INEWHTCPQS GRINASNPCS EYMFLDDTAC NLASLNLIHF VDESTGKIRV
RELLHASALW TVVLEISVLM AHFPSKDIAR LSYEYRTLGL GFANLGTVLM VLGIPYDSPK
ALALAGAISA LMTGQAYVTS AEMAKDLGAF AGYAANSKDM LRVIRNHRRA AHNLSEEEYE
GLSVKPRGID SEYCPTELFE AAGKIWDEAL QKGKKHGFRN AQVSVIAPTG TIGLVMDCDT
TGVEPEFAIV KFKKLAGGGY FKIVNQSVHK ALERLGYTSA QIDDIEKYCK GHGTLSGCPT
ISRQWLKSRG FTDEKIEQVE LQLETVFDIR FAFNKWILGE EFCLSLGFTD EQLNSPDFDM
LQALGATGQD AEAANDYICG TMTIEGAPHL KHEHLPVFDC ASRCGKKGER YITHMAHVHM
MSAVQPFISG AISKTVNMPG TATTVEIGDV YRSAWQHMVK AITIYRDGSK LSQPLNISSY
RDLDEIIMLG TEETLDETKG PREVQERIIE RVFHRSERRL LPKRRKGYIR EAYVGGHKVF
LRTGEYEDGS LGEVFIDMYK EGASFKGLLN CFAVLASKAL QYGMPLEELV DSFTFTRFEP
AGTVQGHNAI KNSTSILDYV FRSIGYDYLG RKDFVHVKAV DEVPEGGDIE EKAKNNGSAV
HEPQLSHAAG QQHVTSEYAA SLKTQVLQAK VQGYTGEQCE NCGSMRVKQN GTCKVCEDCG
TTTGCS
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