Gene Clim_0527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0527 
Symbol 
ID6354878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp595163 
End bp595708 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content49% 
IMG OID642668163 
Productpyruvoyl-dependent arginine decarboxylase 
Protein accessionYP_001942598 
Protein GI189346069 
COG category[S] Function unknown 
COG ID[COG1945] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00286] arginine decarboxylase, pyruvoyl-dependent 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0941976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCATTCG TCCCGACAAA AGTATTCTTC ACCAAGGGTG TCGGAAGACA CAAAGAATAT 
CTATCATCAT TCGAGCTTGC GCTCAGGGAT GCCAAAATCG AAAAATGCAA CCTTGTTACG
GTTTCAAGTA TTTTCCCGCC CAAATGCGAA CGAATCAGCG TCGAGGAAGG CCTTAAACTG
CTTTCTCCCG GCCAGATAAC CTTTGCGGTC ATGGCGCGTA ACGCGACAAA TGAGTACAAC
CGCCTTATTT CCGCATCGGT TGGGGTTGCC ATACCTGCCG ACGATACCCA GTACGGCTAT
CTTTCGGAAC ATCATCCTTA CGGAGAATCC GATGAGCAGT GCGGAGAATA TGCCGAAGAT
CTTGCCGCCA CGATGCTTGC CACCACACTC GGCATCGAAT TCGATCCGAA CAAGGACTGG
GATGAACGCG AAGGTATTTA TAAAATGAGC GGTAAAATCA TCAATTCGTA CAACATTACA
CAGTCTGCAG AAGGCGAAAA CGGTCTCTGG ACTACCGTCA TCTCCTGCGC GGTACTTCTG
CCCTGA
 
Protein sequence
MSFVPTKVFF TKGVGRHKEY LSSFELALRD AKIEKCNLVT VSSIFPPKCE RISVEEGLKL 
LSPGQITFAV MARNATNEYN RLISASVGVA IPADDTQYGY LSEHHPYGES DEQCGEYAED
LAATMLATTL GIEFDPNKDW DEREGIYKMS GKIINSYNIT QSAEGENGLW TTVISCAVLL
P