Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0515 |
Symbol | |
ID | 6354862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 580889 |
End bp | 583459 |
Gene Length | 2571 bp |
Protein Length | 856 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642668147 |
Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
Protein accession | YP_001942586 |
Protein GI | 189346057 |
COG category | [C] Energy production and conversion |
COG ID | [COG1049] Aconitase B |
TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0174967 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCTTG TCAGTCAATA CCGCGCACAT ACTGAAGAGA GAGCCCTGCT CGGGATACCG CCTCTGCCTC TTACGGCAGA TCAGGCACGT TCACTTATCG GGTTGCTGCA GCAGCAGCCT GTCGAGGAAA AAGAGTATCT GCTCGAACTG TTTTGTGAAC ATGTCAGCCC CGGTGTTGAC GATGCCGCAT TCGAGAAGGC CGCGTTTCTC GATGCAGTCA TCAAGGGGGA GTCGATATGC GAAGTCATTA CCCCGGTCGA GGCCGTCAGA ATACTGGGTA CGATGCTTGG CGGATACAAC GTCAAACCTC TCATCGATGC CTTGAGCCAT AAGGATACCG AGGTTTGCAC TACCGCAGCC GCAATGCTCA GGAATGTGCT GCTTGTATAT GATTCATTCG ACGCTGTTGC CGGGTTGTCG GCTACCAATG CCTATGCAAA AGAGGTTCTG CAGTCCTGGG CCGATGCCGA GTGGTTCACG TCGCGTCCGG TACTGCCTGA AAAGATGACG CTGACGGTTT TCAAGGTTCC CGGTGAAACC AATACCGATG ACCTTTCGCC TGCCAGCGAG GCTTTTACAC GCAGCGACAT ACCGCTTCAC GCTCTCTGTA TGCTCGGCTC CAAAATGGAC GATCCGATTG GCACCATTGC GGCCCTCAAG GAAAAAGGCC ATCCTCTTGC CTATGTGGGA GATGTCGTGG GTACGGGATC GAGCAGAAAA TCAGGCATCA ACTCGGTGCA GTGGCATCTC GGAGAGGATA TTCCCGCCGT TCCGAACAAA AGAACCGGCA GCGTGATAAT CGGCAGCATC GTTGCGCCTA TTTTTTTCAA TACGGCCGAA GATTCCGGCG CATTGCCCAT CCAGGCGGAT GTTTCTGCCA TGGAGACCGG CGATGTGATC GATGTTTATC CCTATGAGGG AAAAATCGAG AAGGACGGGG AGATCATCTC CCGTTTCGAT CTCACCCCCA ATACCCTTAC CGATGAGGTC AGGGCGGGCG GCCGTATTCC TCTCATCATC GGAAGGACTC TGACCAAAAA GGCCAGAACC TTTCTTGGAA TGGGTGAGGA CAGCCTCTTT ATCAATCCGC TGCAGCCTGC TGATTCCGGA AAAGGATACA CTCTCGCACA GAAAATGATC GGCAAGGCCT GCGGTCTTCC GGGCGTAAGG CCGGGCATGT ACGTCGAACC CGAAACGCTG ACCGTCGGCT CACAGGACAC AACCGGAGCA ATGACCCGCG ATGAGGTCAA GGAACTTGCC GCATTGAGTT TCAGCGCCGA TCTGGTGATG CAGAGTTTCT GTCATACTGC CGCTTATCCA AAACCGTCGG ACGTAAAACT GCACCGCACG CTTCCTTATT TCATCATGAG CAGAGGCGGC GTTTCGCTTC GTCCGGGAGA CGGCGTCATT CACACCTGGC TGAACCGCAT GGTTCTGCCC GATACGCTCG GTACCGGCGG AGACTCGCAT ACCCGTTTTC CGATCGGCGT CTCGTTCCCC GGCGGTTCGG GGCTTGTCGC TTTTGCCGCT GTGACCGGAA CCATGCCGCT TAATGTACCG GAATCGGTGC TTGTTCGCTT CAGTGGAACG TTGCAGGAAG GAATCACCCT GCGTGATCTT GTCAATGCCA TCCCCTACGT AGCCATCAGG CAGGGGCTCC TTACGGTCGA GAAAAAAGGC AAGAAGAACA TCTTTGCCGG GCGTATTCTT GAAATCGAAG GGCTTCCGCA GCTCAAGGTA GAGCAGGCAT TCGAACTCAG CGACGCCTCT GCCGAGCGCA GTGCAGCGGC CTGTACGGTC CGTCTCGATA AAGAGCCGGT GATCGAATAC CTCAGCTCCA ATATGAAACT GCTCGAACAG ATGATAGAGG AGGGTTACGG CAATCCGGAG ACCCTGCGCA GAAGGATTTC CCGGATGCAG GAATGGTTGG ACAACCCGGT GCTGCTTCAG CCCGACAGCG ATGCGGAATA CGCAGCAGTG ATCGAGATCG ATCTGAACAC GATCACCGAA CCGGTACTGG CCTGTCCCAA CGATCCGGAC GACGTCATGA CTCTCAGTGA GATATTGCTC GATGAGAATC GCCCAAAGAA GATCGACGAG GTTTTTGTCG GGAGCTGTAT GACCAATATC GGGCATTTCC GCGCCCTTGG CGAAGTGCTT CGGAACAAAG GCGTCGCTTC GGCAAGACTG TGGATTGTGC CTCCGACCAA AATGGATATG AAAAAGCTTG TCGAAGAGGG CTATTATTCA GTTTTCGGAG CTGCAGGCGC ACGAATGGAG ATTCCAGGGT GTTCTCTCTG TATGGGCAAT CAGGCGAGGG TTGCCGACAA TGCCGTTGTG TTCTCCACCA GCACGAGAAA CTTTGATAAC CGTATGGGGA AAGGAGCCAA AGTCTATCTC GGTTCTGCAG AACTCGCGGC CGTTGCCGCA TTGCTCGGTC ATCTTCCGAA CAGGGACGAG TATATGGAGG TCGTCAGAAA GCAGCTTTCA GGAGCGCGAG AGGAAGAGAT TTACCGTTAT CTGAACTTCC ATGAGCTTGG AAAAGAGGAC TTGCAATTGC TGGTCGACTA A
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Protein sequence | MSLVSQYRAH TEERALLGIP PLPLTADQAR SLIGLLQQQP VEEKEYLLEL FCEHVSPGVD DAAFEKAAFL DAVIKGESIC EVITPVEAVR ILGTMLGGYN VKPLIDALSH KDTEVCTTAA AMLRNVLLVY DSFDAVAGLS ATNAYAKEVL QSWADAEWFT SRPVLPEKMT LTVFKVPGET NTDDLSPASE AFTRSDIPLH ALCMLGSKMD DPIGTIAALK EKGHPLAYVG DVVGTGSSRK SGINSVQWHL GEDIPAVPNK RTGSVIIGSI VAPIFFNTAE DSGALPIQAD VSAMETGDVI DVYPYEGKIE KDGEIISRFD LTPNTLTDEV RAGGRIPLII GRTLTKKART FLGMGEDSLF INPLQPADSG KGYTLAQKMI GKACGLPGVR PGMYVEPETL TVGSQDTTGA MTRDEVKELA ALSFSADLVM QSFCHTAAYP KPSDVKLHRT LPYFIMSRGG VSLRPGDGVI HTWLNRMVLP DTLGTGGDSH TRFPIGVSFP GGSGLVAFAA VTGTMPLNVP ESVLVRFSGT LQEGITLRDL VNAIPYVAIR QGLLTVEKKG KKNIFAGRIL EIEGLPQLKV EQAFELSDAS AERSAAACTV RLDKEPVIEY LSSNMKLLEQ MIEEGYGNPE TLRRRISRMQ EWLDNPVLLQ PDSDAEYAAV IEIDLNTITE PVLACPNDPD DVMTLSEILL DENRPKKIDE VFVGSCMTNI GHFRALGEVL RNKGVASARL WIVPPTKMDM KKLVEEGYYS VFGAAGARME IPGCSLCMGN QARVADNAVV FSTSTRNFDN RMGKGAKVYL GSAELAAVAA LLGHLPNRDE YMEVVRKQLS GAREEEIYRY LNFHELGKED LQLLVD
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