Gene Clim_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0429 
Symbol 
ID6354424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp472873 
End bp474114 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content56% 
IMG OID642668060 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001942501 
Protein GI189345972 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGATA CGGAACATGC ATCGATACGT GATGTTTTCA GCATGCCGGT TATCGTTGCG 
GCACTGGGCT ACTTTGTGGA CATTTACGAC CTTGTACTTT TCAGTATAGT GAGGGTGCCC
AGCCTGAAGG CTCTTGGTAT CGGCGATGCG TCGCTCATCG ATGACGGAGT TTTTCTTTTG
AACATGCAGA TGATCGGCAT GCTGCTCGGC GGCATTCTCT GGGGATGGCT CGGCGACAAA
AAGGGGAGGC TCAGGATCAT GTTCGCCTCG ATCCTCATGT ATTCGGTTGC CAATATCGCC
AACGGTTTCG TGACCTCGCT GCCAGCATAC GGAGCGCTTC GCTTCATCGC GGGTGTCGGG
CTTGCCGGGG AACTCGGAGC GGGCATCACG CTGGTATCCG AAATCCTGCA CACCCGCATT
CGCGGTTACG GCACCATGCT GGTCGCTTCG ATAGGCGTTT CCGGTGCGAT TCTTGCAAAT
TTCGTCGCCA ACAGTTACGA CTGGCGAACG GCATTTTTCA TCGGCGGAGC TCTCGGACTG
CTGCTGCTGC TTGCCCGGTT CAGGGTAGCC GAATCCGGCA TGTTCCGCAC CATGGAGCAA
AAAACCTCCA TAAGCCGGGG GAACATGCTT GCGCTTTTCA CCGACCGCAG CCGTTTTTTC
CGCTACCTGA ACTCCATCAT GATCGGCGTG CCGATCTGGT TCGTCGTTGG CGTACTCATC
ACCTTTTCGC CTGAATTCGC ACTCGATCTC GGTATCGCCG AACCGGTATC CGCAGGCAAC
GCCGTGATGT TCTGTTACCT CGGCCTGGTC TTCGGCGATC TGTCGAGCGG CCTGTTGAGC
CAGCTCCTGC AGAGCAGAAA GAAAGCCGTA CTGCTTTTCA TGGCAATGAC CGTTGCCGCG
GTTGCGCTCT ATTTCCTGCA GGGGAGCAGT TCGGCATCCT TCTTTTACGG CGTCTGTGCT
TTCCTTGGTT TCGCAGGAGG TTACTGGGCC ATATTCATTA CCGTGGCAGC CGAACAGTTC
GGTACCAACC TCAGGGCGAC GGTTGCCACA ACCGTGCCCA ATCTCGTGCG CGGCATGGTG
GTGCCCATCA CCATGCTCTT TCAGTTCAGC CGCGGCTTTC TCGGGCTGCG TTATGGCGCG
CTTTTCGTCG GCGGAATCTG CGTCATAGCG GCATTTCTCT CCCTTGCCGC ACTTGAAGAG
ACCTTCCACA AAGACCTCGA CTATTTCGAA GAGTTCCTCT GA
 
Protein sequence
MADTEHASIR DVFSMPVIVA ALGYFVDIYD LVLFSIVRVP SLKALGIGDA SLIDDGVFLL 
NMQMIGMLLG GILWGWLGDK KGRLRIMFAS ILMYSVANIA NGFVTSLPAY GALRFIAGVG
LAGELGAGIT LVSEILHTRI RGYGTMLVAS IGVSGAILAN FVANSYDWRT AFFIGGALGL
LLLLARFRVA ESGMFRTMEQ KTSISRGNML ALFTDRSRFF RYLNSIMIGV PIWFVVGVLI
TFSPEFALDL GIAEPVSAGN AVMFCYLGLV FGDLSSGLLS QLLQSRKKAV LLFMAMTVAA
VALYFLQGSS SASFFYGVCA FLGFAGGYWA IFITVAAEQF GTNLRATVAT TVPNLVRGMV
VPITMLFQFS RGFLGLRYGA LFVGGICVIA AFLSLAALEE TFHKDLDYFE EFL