Gene Clim_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0425 
Symboltsf 
ID6354420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp470075 
End bp470941 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content51% 
IMG OID642668056 
Productelongation factor Ts 
Protein accessionYP_001942497 
Protein GI189345968 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.141964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAGA TTTCAGCTAA AGACGTTAAA GACCTGAGAG ATATTACCGG TGTGGGAATG 
ATGGACTGCA AAAAAGCCCT TGAGGAGTCT GCCGGCGATA TGCAGAAAGC TATCGAATAT
CTTCGCAAGA AAGGCGCTGC GCTTGCAGCG AAAAGAGCTG AAAAAGAAGC TCGCGAAGGT
ATGGTTGCCA TCAGACTTTC CGAAGACCGC AAGGCAGGAG TCATTCTCGA ATTGAACTGT
GAAACCGATT TCGTTGCACG TGGTGCTGTG TTTACCGGTT TTGCCGGCGC CCTTACCTCT
CTTGCCCTTG ACAATGCGGC AGCATCTCCT GAAGAGCTGC TTGCCCTCTC TCTTGGCGAA
GAGTATGGGA ATGAGAAGGT TGATGATGCC ATGAAAACCA TGACCGGCAG GCTTGGCGAA
AAACTTGAAC TCAAACGTCT TGCCTTGTTC CTTGCTCCCG ATGGTGTCGT TGAATCCTAT
GTCCATCCCG GCGCACAGCT CGGTTCACTC GTTCAGCTTG CGACCGACAA GCCTGAAGAA
GCCGGCGTTC TTGCCAGGGA TATTGCCATG CAGGTAGCTG CGGCTTCCCC GATCGTTGCC
GACCGGTCAG CGGTTCCGGC CGATTATATC GAGAAGGAGA GGGAGATATA TCGTCAGCAG
GCTCTCGGTC AGGGTAAACC TGAACAGTTT GTCGAAAAGA TCGTTACCGG AAGACTTGAG
AAGTACTATC AGGAGGTAGT GCTTACCGAG CAGTCCTTTA TCAAGGACGG CAACATAAAA
GTGTCTGATG TGCTCAGTGA TTTCAGAAAG AAGCATCAGG CGCAAGTCGA TGTTAAAGGA
TTTGTCCGCT ATCAGTTAGG AGAGTAA
 
Protein sequence
MSQISAKDVK DLRDITGVGM MDCKKALEES AGDMQKAIEY LRKKGAALAA KRAEKEAREG 
MVAIRLSEDR KAGVILELNC ETDFVARGAV FTGFAGALTS LALDNAAASP EELLALSLGE
EYGNEKVDDA MKTMTGRLGE KLELKRLALF LAPDGVVESY VHPGAQLGSL VQLATDKPEE
AGVLARDIAM QVAAASPIVA DRSAVPADYI EKEREIYRQQ ALGQGKPEQF VEKIVTGRLE
KYYQEVVLTE QSFIKDGNIK VSDVLSDFRK KHQAQVDVKG FVRYQLGE