Gene Clim_0422 details

Gene Information

• Locus tag: Clim_0422
• Symbol: rplM
• ID: 6354417
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 468233
• End bp: 468682
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 642668053
• Product: 50S ribosomal protein L13
• Protein accession: YP_001942494
• Protein GI: 189345965
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.00538272
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAGA CGTTAAGTTT TAAAACATAT TCGGCAAAGC CTGCGGAAGT CGAGCGGAAG 
TGGTATGTCA TCGATGCCGA AGATCAGATC CTGGGAAGAA TGGCGGCTGA AATTGCCAAG 
GTACTCAGAG GCAAGCACAA ACCGCAGTTC ACTCCGCATA TCGATACCGG TGATTTCATC 
GTTGTGACCA ATGCCGAGAA AGTCGCTCTC AGCGGAAAAA AGATCGAGTA TAAAACATAC 
TTCCACCATT CAAACTATCC CGGTGGCGGC AAGTTCGATC ATGTCAAGGA TCTTCTGAAG 
AAAAAACCCG AAAAAGTTAT CGAACACGCG GTGTGGGGAA TGCTTCCGCA CAACAACCTC 
GGACGCCAGC TGTTCAAGAA ACTCAAGGTC TATGCCGGTT CGGAGCATCC GCATACAGCG 
CAGTGCCCCG TTGAGCTGAA AGTTAACTAA 

 

Protein sequence

MSKTLSFKTY SAKPAEVERK WYVIDAEDQI LGRMAAEIAK VLRGKHKPQF TPHIDTGDFI 
VVTNAEKVAL SGKKIEYKTY FHHSNYPGGG KFDHVKDLLK KKPEKVIEHA VWGMLPHNNL 
GRQLFKKLKV YAGSEHPHTA QCPVELKVN