| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0406 |
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| Symbol | valS |
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| ID | 6354401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 445751 |
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| End bp | 448465 |
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| Gene Length | 2715 bp |
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| Protein Length | 904 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642668037 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001942478 |
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| Protein GI | 189345949 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAG AGAGAGCGCC TTTCAATCTT GAGAAAACCT ATCACCATCA GGAGGTCGAA
GACCGCTGGA GAAGCGCTCA CTGGGAGGCT CTCGGCAGTT TTCATGCCGA GAGCGGTCGA
GTGCTTGCCG AAGGGAAAAC GCCTTATACG GTGCTGATGC CACCTCCCAA CGTAACCGGC
AGCCTTACCC TCGGTCATGT GCTCAATCAC ACCCTTCAGG ATATTTTCAT CCGTTACAGC
CGTATGACCG GCAAGGAAGC CCTCTGGCTT CCCGGAACCG ATCATGCAGG CATAGCAACC
CAGACCGTTG TTGAAAAGAA ACTCAGAAAA GAGGGGATTT CACGCCATGA CCTCGGTCGA
AAAGCCTTTC TTGACCATGT ATGGCGCTGG CGGGAGGAGT ATGGCGGTCT TATTCTACGC
CAGCTCCGCA GGCTTGGTAT CTCCTGCGAC TGGAGGCGGA ACCTTTTCAC CATGGACGAT
CGTGCTTCCG AAGCGGTCAT CAATGCATTC ATCGCCCTCT ACCGTGACGG GCTGATCTAT
CGTGGAACCC GTATTATCAA CTGGTGTCCG GTTTCACAGA CAGCCCTCTC CGATGAGGAA
GTGATCATGA AACCCCGGCG CGACAAACTG GTTTATATAC GCTATGCGCT GGCAAAGCGT
CCGGGCGAGT ATATCACCAT AGCCACAGTC CGTCCGGAAA CCATTCTTGC CGACGTGGCC
ATAGCGGTCA ATCCTGCCGA TCCCCGTTAT CGTGATCTTG TTGGAGAGCT TGCCGTCGTT
CCGGTTGCCG GACGCCATAT TCCGGTTATT GCCGATGACT ATGTCGATAT CGAATTCGGT
ACCGGAGCCC TGAAAATTAC TCCGGCTCAC GATCCGAACG ACTATGAGGT TGCCCGTCGT
CATAATCTTC CGGTTATTTC GGTGGTTGGC AAGGATGGCA GAATGACCGA CGAGTACGGG
TATGCAGGCA TGGATCGATT CGATGCCCGC GAGAAAATTC TTTCAGATCT TGAGGAGCGG
GGTGCCCTTG AACGTGTCGA GGAGTATGAG CACAATGTCG GTTACTCCGA ACGTGCCGAT
GTTGTTGTAG AGCCCTATCT TTCCGAGCAG TGGTTTGTTC GTATGAAACC GCTGGCCGAG
CGTGCGCTGC AGGTGGTGAA CGACAAAGAG ATCCGCTTTC ATCCGCCGCA CTGGATCAAT
ACCTATCGCC ACTGGATGGA GAATATCCAG GACTGGTGTA TCTCCCGTCA GCTCTGGTGG
GGGCACCGCA TTCCTGCCTG GTATGATTCC GACGGCAGGG TATGGGTCGC TTCATCATAT
GAGGAGGCAT GTCATCTTGC GGGAACCGAC AAGCTGGTTC AGGACGACGA TGTGCTCGAT
ACCTGGTTTT CATCGTGGCT CTGGCCGCTT ACCACACTCG GCTGGACAGG GCCTCACAGC
GATAACGACG ACCTGAGGGC CTTTTATCCG ACCGATACCC TTGTAACCGG TCCGGACATT
ATTTTCTTCT GGGTGGCCCG TATGATTATG GCCGGGCTGT ATTTCAAGGG CGACGTTCCC
TTCCGCGACG TTTACTTTAC CAGCATCATC AGGGACATGA AAGGCCGGAA ACTTTCCAAA
TCACTCGGAA ACTCGCCGGA TCCGCTCAAG GTGATCGATA CCTATGGTAC CGACGCATTG
CGATTTACGA TTATCTATAT AGCTCCGCTC GGCCAGGACG TGCTCTTTGG AGAGGAGAAG
TGCGAGCTTG GCCGGAATTT TGCCACCAAA CTCTGGAACG CTTCAAGACT GGTGTTCATG
CAGCGGGAAA AATGGTTTGA TTCGCTCGAG GAGTTTGAAT CGGCCTACAG CGGGTTTTCT
CCTGATCGGA TGACCTTTGC CTTTGCTGAA GAGCATGTGC TGACGGCCAG GTATCACTCC
ATGCTTGACC GTTATCATAC GGCATTCGGA CAGTTCAGGG TCAACGACAT CGTCAGGAAT
GTTTATGAAT TTTTCTGGGG AGATTTCTGC GACTGGTATC TGGAAGCCCT TAAAATCTAT
CTTTCGGGTA TTTCCGATGC CGATGCGGCC AGAAAAGCCG TTCTGCTTTC CGTATATGTT
CTTGACGGAA CGCTCAAGGC TCTGCATCCG GTCATGCCCT TCATTACCGA TGAGATATGG
CATTTTATCC TGAAACGTCC GCATGGCCGG TCGGTATCAC TCTCGTCGAT GCCTGAAGCG
GAAAACGAAT GGCTCGACCT GGATGTTTCG CTGTTATCGC ATCCGCGTGC GATCATTTCC
GAGGTCAGAA GTCTGCGTTC GCTTTTTGCC GTTCCGTCCA CCAGTACGGC GCCGCTGATC
ATCAGAGCTG CCGATGCGGC GGCTGCAGAT CTGCTTATGG CCGACAGCAA TATTATTGCG
GCCATGACTA AATGTGACGT TCAGATTACC GCTTCCGCTG AAAGACCCCG GCACTCAGCG
GCTTCGGTGG TTGAGGGGAA TGAACTTTTT GTGCAGCTCG AAGGTTTGAT TTCCTTCGAA
AAAGAGAGCG CACGGCTTCA GAAAGAGATT TCCAATATTG CCTCTTATGC GGCTTCTCTG
AAAAGGAAAC TTGAAAACGG CGCGTTTACG GCAAATGCGC CTCAGGATGT CGTTGACAGG
GAAAAGGATA AACTTTCCGA AGCGGAACGC AATCTTGAAA AGCTCAGAAA CAACCTCGAT
GTTCTTGCCG GATAG
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| Protein sequence | MSEERAPFNL EKTYHHQEVE DRWRSAHWEA LGSFHAESGR VLAEGKTPYT VLMPPPNVTG
SLTLGHVLNH TLQDIFIRYS RMTGKEALWL PGTDHAGIAT QTVVEKKLRK EGISRHDLGR
KAFLDHVWRW REEYGGLILR QLRRLGISCD WRRNLFTMDD RASEAVINAF IALYRDGLIY
RGTRIINWCP VSQTALSDEE VIMKPRRDKL VYIRYALAKR PGEYITIATV RPETILADVA
IAVNPADPRY RDLVGELAVV PVAGRHIPVI ADDYVDIEFG TGALKITPAH DPNDYEVARR
HNLPVISVVG KDGRMTDEYG YAGMDRFDAR EKILSDLEER GALERVEEYE HNVGYSERAD
VVVEPYLSEQ WFVRMKPLAE RALQVVNDKE IRFHPPHWIN TYRHWMENIQ DWCISRQLWW
GHRIPAWYDS DGRVWVASSY EEACHLAGTD KLVQDDDVLD TWFSSWLWPL TTLGWTGPHS
DNDDLRAFYP TDTLVTGPDI IFFWVARMIM AGLYFKGDVP FRDVYFTSII RDMKGRKLSK
SLGNSPDPLK VIDTYGTDAL RFTIIYIAPL GQDVLFGEEK CELGRNFATK LWNASRLVFM
QREKWFDSLE EFESAYSGFS PDRMTFAFAE EHVLTARYHS MLDRYHTAFG QFRVNDIVRN
VYEFFWGDFC DWYLEALKIY LSGISDADAA RKAVLLSVYV LDGTLKALHP VMPFITDEIW
HFILKRPHGR SVSLSSMPEA ENEWLDLDVS LLSHPRAIIS EVRSLRSLFA VPSTSTAPLI
IRAADAAAAD LLMADSNIIA AMTKCDVQIT ASAERPRHSA ASVVEGNELF VQLEGLISFE
KESARLQKEI SNIASYAASL KRKLENGAFT ANAPQDVVDR EKDKLSEAER NLEKLRNNLD
VLAG
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