Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0391 |
Symbol | |
ID | 6354386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 430864 |
End bp | 431412 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642668022 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001942463 |
Protein GI | 189345934 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.558013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGGTAA ATGTAAAAAA AACACCAGTG TGTATCAGAA TTTTATTTAT CTGTTATGAA AACATCTGCC GTTCTCCCAT GGCGGCGGGT ATATTTTTCA GTCACGCGGA AAGGCATGGG CTTGGCCATT TATTTTCTGT CGAGTCAGCA GGTACCCGTT CTTATCAGCA GGGTTCATCG CCTGATCCTC GAGCTGCAGC GGCAGCATTT CAGCTCGGTG TTGCGATATC GTCGAACTGT GCTCGTGGAA TCGATGCACT CGATCTGTTT GATTATGACT GGATTTTTGT GATGGACAAC GAGAATTATG AGGAGATCTG CCTGTTGACC GGATTTGTCG AAAAGCCGAA AGTTCGACTC GTGATGTCGT TCGTGCCGGG GCGTGAAGAG GAGGAAATTC AGGATCCCTA TTACGGGACG CACAGGGAGT TCGAACAGGT CAGGGATGAT CTTTTTCTTG CTTCCGATCA TATTCTCCGA AATCTGGTCG TCTCTTGTGA AGAGGGTTCG CCCGATTATT CCCGAAATGC TATTCCGAAG GTGAGGTGA
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Protein sequence | MLVNVKKTPV CIRILFICYE NICRSPMAAG IFFSHAERHG LGHLFSVESA GTRSYQQGSS PDPRAAAAAF QLGVAISSNC ARGIDALDLF DYDWIFVMDN ENYEEICLLT GFVEKPKVRL VMSFVPGREE EEIQDPYYGT HREFEQVRDD LFLASDHILR NLVVSCEEGS PDYSRNAIPK VR
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