Gene Clim_0391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0391 
Symbol 
ID6354386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp430864 
End bp431412 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content48% 
IMG OID642668022 
Productprotein tyrosine phosphatase 
Protein accessionYP_001942463 
Protein GI189345934 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.558013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGGTAA ATGTAAAAAA AACACCAGTG TGTATCAGAA TTTTATTTAT CTGTTATGAA 
AACATCTGCC GTTCTCCCAT GGCGGCGGGT ATATTTTTCA GTCACGCGGA AAGGCATGGG
CTTGGCCATT TATTTTCTGT CGAGTCAGCA GGTACCCGTT CTTATCAGCA GGGTTCATCG
CCTGATCCTC GAGCTGCAGC GGCAGCATTT CAGCTCGGTG TTGCGATATC GTCGAACTGT
GCTCGTGGAA TCGATGCACT CGATCTGTTT GATTATGACT GGATTTTTGT GATGGACAAC
GAGAATTATG AGGAGATCTG CCTGTTGACC GGATTTGTCG AAAAGCCGAA AGTTCGACTC
GTGATGTCGT TCGTGCCGGG GCGTGAAGAG GAGGAAATTC AGGATCCCTA TTACGGGACG
CACAGGGAGT TCGAACAGGT CAGGGATGAT CTTTTTCTTG CTTCCGATCA TATTCTCCGA
AATCTGGTCG TCTCTTGTGA AGAGGGTTCG CCCGATTATT CCCGAAATGC TATTCCGAAG
GTGAGGTGA
 
Protein sequence
MLVNVKKTPV CIRILFICYE NICRSPMAAG IFFSHAERHG LGHLFSVESA GTRSYQQGSS 
PDPRAAAAAF QLGVAISSNC ARGIDALDLF DYDWIFVMDN ENYEEICLLT GFVEKPKVRL
VMSFVPGREE EEIQDPYYGT HREFEQVRDD LFLASDHILR NLVVSCEEGS PDYSRNAIPK
VR