Gene Clim_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0346 
Symbol 
ID6354340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp382712 
End bp383536 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content54% 
IMG OID642667976 
Productglutamate racemase 
Protein accessionYP_001942418 
Protein GI189345889 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.633772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGACAC ACCAACACAA AACCGCTCCG GAAAGCCCGA TAGGTATTTT TGATTCGGGT 
GTAGGCGGCC TGACCGTCGT CAGGGCCATG CAGGCGATTC TGCCTGCCGA ACGTCTTATT
TATTTCGGCG ACACCGCCCG GGTGCCTTAC GGCTCCAAAT CACAGGTCAC CATCCGAAAA
TATGCGCATG ACGACACGGC CATCCTGATG CGGTACCAGC CAAAAATGAT TATAGTCGCC
TGCAATACGG TTTCGGCACT CGCTCTCGAT GTCGTTGAAA AAACATGCGG AAACATTCCG
GTTATTGGCG TTCTCGAAGC GGGAGCCCAG CTCGCCGTAA GCAGGAGCGA ACATAAACGC
ATCGGCGTAA TCGGAACCCA GGCAACCGTC TGCTCGAACG CCTATGCATG TGCGATCAAC
ATGCTCGACT CCGAGGTTAC GGTGCATTCA AAGGCATGTC CGCTCTTTGT TCCGCTTGCC
GAAGAGGGAT TCACCGATCA TCCGGCAACA CGCCTTATCG CAGCGGAGTA TCTCAGGGCA
TTTGACGGAC ACGATATCGA CACCCTGGTA CTCGGATGTA CCCACTACCC GATCCTGCGC
AGCATGATCG AGCAGACCAT CGGACCGGAT ATTCGCATCA TCGATTCGGC AGAAGCCGTC
GCCTGCAGGG CAAAAGAGCT GCTCACTGAA ACAGGCATGC TGAACACAAC CTCAGAAACC
GAAAATCCTC ACCTTCTCGT CAGCGACCTT CCCCAGAAGT TCAGCATGCT CTACCGTCTT
TTCATGGGTT CTGAAATGCC CGACGTGGAA CTGGTTGAAG TGTGA
 
Protein sequence
MQTHQHKTAP ESPIGIFDSG VGGLTVVRAM QAILPAERLI YFGDTARVPY GSKSQVTIRK 
YAHDDTAILM RYQPKMIIVA CNTVSALALD VVEKTCGNIP VIGVLEAGAQ LAVSRSEHKR
IGVIGTQATV CSNAYACAIN MLDSEVTVHS KACPLFVPLA EEGFTDHPAT RLIAAEYLRA
FDGHDIDTLV LGCTHYPILR SMIEQTIGPD IRIIDSAEAV ACRAKELLTE TGMLNTTSET
ENPHLLVSDL PQKFSMLYRL FMGSEMPDVE LVEV