Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0346 |
Symbol | |
ID | 6354340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 382712 |
End bp | 383536 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642667976 |
Product | glutamate racemase |
Protein accession | YP_001942418 |
Protein GI | 189345889 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.633772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAGACAC ACCAACACAA AACCGCTCCG GAAAGCCCGA TAGGTATTTT TGATTCGGGT GTAGGCGGCC TGACCGTCGT CAGGGCCATG CAGGCGATTC TGCCTGCCGA ACGTCTTATT TATTTCGGCG ACACCGCCCG GGTGCCTTAC GGCTCCAAAT CACAGGTCAC CATCCGAAAA TATGCGCATG ACGACACGGC CATCCTGATG CGGTACCAGC CAAAAATGAT TATAGTCGCC TGCAATACGG TTTCGGCACT CGCTCTCGAT GTCGTTGAAA AAACATGCGG AAACATTCCG GTTATTGGCG TTCTCGAAGC GGGAGCCCAG CTCGCCGTAA GCAGGAGCGA ACATAAACGC ATCGGCGTAA TCGGAACCCA GGCAACCGTC TGCTCGAACG CCTATGCATG TGCGATCAAC ATGCTCGACT CCGAGGTTAC GGTGCATTCA AAGGCATGTC CGCTCTTTGT TCCGCTTGCC GAAGAGGGAT TCACCGATCA TCCGGCAACA CGCCTTATCG CAGCGGAGTA TCTCAGGGCA TTTGACGGAC ACGATATCGA CACCCTGGTA CTCGGATGTA CCCACTACCC GATCCTGCGC AGCATGATCG AGCAGACCAT CGGACCGGAT ATTCGCATCA TCGATTCGGC AGAAGCCGTC GCCTGCAGGG CAAAAGAGCT GCTCACTGAA ACAGGCATGC TGAACACAAC CTCAGAAACC GAAAATCCTC ACCTTCTCGT CAGCGACCTT CCCCAGAAGT TCAGCATGCT CTACCGTCTT TTCATGGGTT CTGAAATGCC CGACGTGGAA CTGGTTGAAG TGTGA
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Protein sequence | MQTHQHKTAP ESPIGIFDSG VGGLTVVRAM QAILPAERLI YFGDTARVPY GSKSQVTIRK YAHDDTAILM RYQPKMIIVA CNTVSALALD VVEKTCGNIP VIGVLEAGAQ LAVSRSEHKR IGVIGTQATV CSNAYACAIN MLDSEVTVHS KACPLFVPLA EEGFTDHPAT RLIAAEYLRA FDGHDIDTLV LGCTHYPILR SMIEQTIGPD IRIIDSAEAV ACRAKELLTE TGMLNTTSET ENPHLLVSDL PQKFSMLYRL FMGSEMPDVE LVEV
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