Gene Clim_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0303 
Symbol 
ID6353820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp340039 
End bp341004 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content50% 
IMG OID642667932 
Productriboflavin biosynthesis protein RibF 
Protein accessionYP_001942376 
Protein GI189345847 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0196] FAD synthase 
TIGRFAM ID[TIGR00083] riboflavin kinase/FMN adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.35935e-09 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTTG TTATATATGA CAATCGTCAG CTTTCCGTTT ATGGCAATGG TTCGTTGACT 
TCGCTGTCGC CGGAAGAGTC TGCGGTTACT ATCGGTTCAT TTGACGGCGT ACATCGGGGG
CATCGTAAAA TTATTTCGGG CATGCTCGAT ATTGCCCGTT TTCGCAAGCT CAGAAGCGTC
GTTGTTACCT TTGAGCCTCA TCCGAGACGG GTGTTGACTG CTCACGCAGA TGAGTCGATC
GAGATTCTTA CGACGCTCGA TGAAAAAATC GAGCAGATGG CCGGTCTTGG AGTCGATCTG
CTCTTTGTCG TTCGTTTTAC CCCTGAGCTG GCCGCATGGA GTTCCGAATT GTTTATTGAA
CAGGTTCTTG TCAGGATGCT TCACGCCAGA AACGTTGTTG TCGGCTATGA TCACGGCTTT
GGGCGGAACA GGAGCGGCAG CGGAAAAACA CTCTCACAGC TTGGTGAGCT TTACGGTTTT
CAGGTCGATG TGATTGAAGA GTTCCGTATT GGCAGTGAGC ATTTTTCCAG CACGAAAATC
AGGGCGCTGC TCAAAAATGG TTCAATACGT GATGCCAACG CATTTCTGGG GGTGCCTTAT
GTCGTGAGCG GCCGAGTGAC AAGCGGTAAA CAGCTTGGGC GTTTACTGGG ATTTCCTACC
GCTAATCTGA TGCTTCCGGA TCCACAGAAA CTGCTTCCCC GTTCCGGCGT TTACATGGCA
ACCACGGTGA TCGACGGCGA GTCTTACAGG GCGATGATGA ATATCGGCTG TCGTCCAACG
GTATCGGATG AGTGCGACAT TCGTGTTGAA GCCCATATTC TCGGATACTC AGGCCACCTC
TACGGTCGGC AGATCAGGTT CAGCATTCTT GGATTTATCC GGGAAGAGAA GAAATTCGAT
TCACTGGATC TGTTGCGGGA GCAGCTTGAA AAAGATAAAA AAACGGTGGA GTTGTTTTGT
GAATAA
 
Protein sequence
MNVVIYDNRQ LSVYGNGSLT SLSPEESAVT IGSFDGVHRG HRKIISGMLD IARFRKLRSV 
VVTFEPHPRR VLTAHADESI EILTTLDEKI EQMAGLGVDL LFVVRFTPEL AAWSSELFIE
QVLVRMLHAR NVVVGYDHGF GRNRSGSGKT LSQLGELYGF QVDVIEEFRI GSEHFSSTKI
RALLKNGSIR DANAFLGVPY VVSGRVTSGK QLGRLLGFPT ANLMLPDPQK LLPRSGVYMA
TTVIDGESYR AMMNIGCRPT VSDECDIRVE AHILGYSGHL YGRQIRFSIL GFIREEKKFD
SLDLLREQLE KDKKTVELFC E