| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0299 |
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| Symbol | nusA |
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| ID | 6353816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 334432 |
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| End bp | 335973 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642667928 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001942372 |
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| Protein GI | 189345843 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000558254 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAGAA AGCAGATAAA AGCGGAAGGG CAGGACAGGC GGGCGCAGAT AGCGAGCGCT
TTCGGGGAAA TCGAGCAGTC GAAGATCTTT CTGGATAAAC GAACGGAGAG TGCGGCTGTA
AAGATGGATA TAGCTGATCT TCTCAAGGAT ATTATTCAGA AACAGCTTCG CAAGGATTAT
GATCCGGAAG TAGAGTCAAA TATTTTTATC AATCCGGAAC GAGGCGATTT TGAGGTCTAT
ATTCTCAGAA AAATCGTTCA GGAGGTCGAT ATTCCCGCTA TTGAAATCAG TCTGGACGAG
GTGAGAAAAA TCGATGAATC TCTTGATCTC GGCGATTTCT ACGAAGAGGG CCCGATCCGT
CTCGAAGATT ATCTGACACG AAAATCTATT CAGATAATCA AACAGTCCGT ACAAAAGAAA
GTCCGCGATC TTGAACGGCT TGTTGTGTAT GAAGAGTGCC TGGAAAAAGT CGGAGAGGTT
GTTGCCGGAG AGGTTTACCA GATTCGTTCC AATGAGGTCA TCTTTACCTA TAATACCTCG
AAGGATCATC GGGTTGAGCT GGTGCTGCCG AAATCGGAGA TGATGAAAAA AGACAATCCC
CGCAGAACGC CAAGGATGAA ACTCTACGTC AAACGGATCG AACGGGAGAA AGCCAAGGTG
CGGCTTGATG ACGGAGGCGT GGTTGAAAAG GAAAAACCCG ATGGCGGCAT GAAGGTTATC
GTGTCACGAG TCGATGATCG TTTTCTCTAC AAGTTGTTTG AACACGAAGT CCCCGAAATA
CTGGACGGTC TCATTGTTAT CAAGGGTATT GCCCGCGTTC CCGGAGAACG GGCGAAAGTT
TCCGTCGAGT CGACCAGTGC ACGAATCGAT CCCGTAGGAG CGAGTGTCGG TTATCGCGGG
AAACGTATTC AGAGTATAGT CAAGGAGCTC AATAACGAGA ATATCGACGT CATCTACTAT
ACCGACGAAC CGCAGATATA CATTGCCAGA GCGCTGCAGC CGGCCAAGAT AGATCCGCTG
ACGGTTCATG CCGATATAAA AACCCGCAAG GCAAGGGTTA TGCTCAAGCC CGATCAGATC
AAGTATGCGA TCGGCAAGAA CGGCAATAAC ATCCATCTTG CAGAAAAGCT TACCGGTTAT
GAAATCGATG TCTATCGTGA TGTGATCGAC AAATCACTGG AAGATCCGAC CGATATCGAC
ATCATCGAGT TCCGTGAAGA GTTCGGCGAC GATATGCTCT ACCAGCTGCT CGATGCCGGT
TTCGATACAG CTAAAAAAGT ACTGAAGGCG GGCATCGAAG AGATCGAACA AGCCCTTCTT
GGCCCGGCAA AACCTGAGGA GGTTCTTATC TTCGGAAAAG GGCGTAAAGC TCCTTTCAAA
CCGAGAGAAC GCAAGGTAAC GGATGAGGAA AAACGGTATT GGCGAAAGAT TGCTGAGAAC
ATTTACCGGA CGGTCAAAGA GCAGTTCAGC GATTCGGATT TTCGTGACCT GATCGATGAT
GCCGGTGACC GGGAAACGGT CAGTCTGAGT GCTGATGAAT GA
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| Protein sequence | MARKQIKAEG QDRRAQIASA FGEIEQSKIF LDKRTESAAV KMDIADLLKD IIQKQLRKDY
DPEVESNIFI NPERGDFEVY ILRKIVQEVD IPAIEISLDE VRKIDESLDL GDFYEEGPIR
LEDYLTRKSI QIIKQSVQKK VRDLERLVVY EECLEKVGEV VAGEVYQIRS NEVIFTYNTS
KDHRVELVLP KSEMMKKDNP RRTPRMKLYV KRIEREKAKV RLDDGGVVEK EKPDGGMKVI
VSRVDDRFLY KLFEHEVPEI LDGLIVIKGI ARVPGERAKV SVESTSARID PVGASVGYRG
KRIQSIVKEL NNENIDVIYY TDEPQIYIAR ALQPAKIDPL TVHADIKTRK ARVMLKPDQI
KYAIGKNGNN IHLAEKLTGY EIDVYRDVID KSLEDPTDID IIEFREEFGD DMLYQLLDAG
FDTAKKVLKA GIEEIEQALL GPAKPEEVLI FGKGRKAPFK PRERKVTDEE KRYWRKIAEN
IYRTVKEQFS DSDFRDLIDD AGDRETVSLS ADE
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