Gene Clim_0261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0261 
Symbol 
ID6353778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp293640 
End bp294293 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content53% 
IMG OID642667891 
Productprotein-L-isoaspartate O-methyltransferase 
Protein accessionYP_001942335 
Protein GI189345806 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.51087e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCAT CAGACAGATC AATGGCGGTG AAACGCATGG AGATGGTTCA GAGTCTCAGG 
CAGAAAGGTC TGGTCAATGA ACGGGTACTC GATGCGATGC AGAGGATAGA GCGGCATCGG
TTCGTTGACA GGGAAAGTTC TGTTTCTGCT TATGAAGACT CGGCTTATCC GATAGGGTAT
GGCCAAACCA TATCGCAGCC TTATACAGTG GCCTATATGA CCACGCTGCT TCTGGAGCGT
TGTCCTCCGC CCGGAAAGGT TCTTGAAATC GGTACCGGAT CGGGCTACCA GGCCGCAATT
CTCGATGCGC TGGGTTACCG GGTTTATTCC GTAGAGCGCA TCCCGGAACT CCATGACCGG
GTTGTCGGGT TGTTCAGAAG TCTCGGGCTT GCGATTTCAT GCAGGGTTGG CGACGGTTCT
CTGGGTTGGG AGGAGGAGGC TCCATTTGAC GGCATTATGG TAACCGCAGC AGCTCCGCGC
TGTCCGGAGC ATCTTTTAGA GCAACTCGGA GATAACGGAT GTCTTGTTAT TCCCGTCGGT
GAACATAATA TGCAGCAGAT GACCGTTTAC CGGCGCGTTG GGGAGAGGTT TGAAAAGGAA
CTGTTTCATC ATTTCGCATT TGTGCCGCTG ATCGGCAGGG AAGGCTGGAA CTGA
 
Protein sequence
MDASDRSMAV KRMEMVQSLR QKGLVNERVL DAMQRIERHR FVDRESSVSA YEDSAYPIGY 
GQTISQPYTV AYMTTLLLER CPPPGKVLEI GTGSGYQAAI LDALGYRVYS VERIPELHDR
VVGLFRSLGL AISCRVGDGS LGWEEEAPFD GIMVTAAAPR CPEHLLEQLG DNGCLVIPVG
EHNMQQMTVY RRVGERFEKE LFHHFAFVPL IGREGWN