Gene Clim_0255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0255 
Symbol 
ID6354712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp285833 
End bp288382 
Gene Length2550 bp 
Protein Length849 aa 
Translation table11 
GC content52% 
IMG OID642667884 
ProductATPase AAA-2 domain protein 
Protein accessionYP_001942329 
Protein GI189345800 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGAA ATTTTTCAAA TAGAGTACAG GATGTTATCC GGCTAAGCCG TGAAGAGGCG 
TTGCGGCTGG GTCACGATTA TATCGGTACC GAGCATCTGC TTCTCGGTCT TATCCGGGAA
GGGGAGGGTA TTGCCGCCCG GATTCTCAGA AACCTTAAAA TCGATCTGTT GCGCCTGAAA
CAGAAAATAG AGGAGAGTAC GCATCCCAAG GTACCGGCAA CGCAGATGGG CAACGTCCCG
CTTACCAAGC AGGCCGAGAA GGTGCTGAAG ATAACCTATC TCGAAGCCAA GATCTGCAAA
TCCAACGTTA TCGGCACCGA GCACCTACTG CTTTCGATTC TCAAGGGCGA CGACAATATT
GCGGCCCAGA TTCTCGAACA GTTCGGGGTA ACCTACGATC TTGTCAAGGA CGAACTGATC
AGCATCACTA CCGGTAAAAG CGAGTCCGAT GAGCCGCCGA TGGAAGGATC CTATTCGTCG
GGATCGGCTG AACGCCTGCC GAAAAAAGGC GATCCCAAAC GTGGTGAGCG CACAAAAACG
CCGGTACTCG ACAATTTCGG CCGTGATATT ACCCGGCTTG CCCTGGAGGA CAAGCTTGAT
CCGATTATCG GGCGCGAAAA AGAGATCGAG AGGGTCGCGC AGGTACTCAG TCGCCGGAAA
AAGAACAATC CAGTGCTGAT CGGTGAGCCC GGCGTGGGAA AGACCGCAAT TGCGGAAGGT
CTGGCGCTGA AAATTGTGCA GCGCAAGGTT TCTCGCGTTC TGTACGACAA GCGGGTCGTG
GCTCTCGATC TTGCTGCGCT TGTAGCCGGA ACGAAGTATC GGGGCCAGTT CGAAGAACGC
ATGAAGGCGC TTATGAACGA GCTGGAGCGT TCGCGCGATG TCATTCTCTT TATCGATGAG
TTGCACACCA TCGTTGGAGC GGGCGGAGCT TCGGGTTCGC TCGATGCGAG CAATATATTC
AAGCCGGCAC TTGCCAGGGG TGAATTGCAG TGCATCGGCG CCACTACTCT CGACGAGTAT
CGCCAGTACA TCGAAAAGGA CGGAGCGCTC GATCGCCGCT TTCAGAAAAT TATGGTTGAG
CCGGCTTCGG TTGACGAAAC CATACAGATT CTCAACAACA TCAAGTCGAA GTACGAGTCG
CACCACCATG TGCAATATTC CGAAGACGCC ATCGAAAAGG CTGTCAAGCT TTCTGAGCGC
TACATTACCG ATCGTTTCCT GCCTGACAAG GCCATCGATG TCATGGACGA GGCCGGAGCG
AGGGTGCATC TGAGCAACAT TCATGTGCCC GTGGAGATAC TTGACCTCGA AAAGTCGATC
GAAGAGATCA AAGCAGAGAA GAACCAGGTG GTGAAGATGC AGAATTTCGA GGAGGCTGCA
ACGCTTCGCG ACAAGGAGAA GCATCTGCTC GAAGCTCTCG ATCATGCCAA ACAGGAGTGG
GAGGAAAGGG CATCCGAAAG CGTTTATGAC GTCACCGAGG AAGATATCAC TTCCGTGATT
GCCATGATGA CCGGCATTCC GGTGGTCAAG GTTGCCCAGT CGGAATCCAG GAAACTGCTC
TCGATGGAGG CCGATCTCAT GAAAGAGGTG ATCGGTCAGG ACGAAGCGAT CAAAAAAATC
ACCAAGGCGA TTCAGCGTAC CCGTGCCGGT TTGAAGGATC CTTCCCGTCC TATCGGTTCC
TTTATTTTTC TCGGGCCGAC CGGCGTCGGT AAAACCGAAC TCGCCAAAGC GCTGACCAGG
TATATTTTCG ACAGTGAAGA TGCCCTGATC AGGGCGGATA TGAGCGAGTA CATGGAAAAG
TTCTCCGTCA GTCGTCTTGT CGGAGCCCCT CCCGGCTATG TCGGGTATGA AGAGGGAGGA
CAGCTTACAG AAAAAGTAAG GCGCAAGCCA TACTCGGTTG TATTGATCGA CGAGATCGAG
AAAGCGCATC CCGACGTATT CAATATTCTC CTGCAGGTGC TCGACGAAGG GGTGCTGACC
GATGGTCTTG GCCGCAAGGT CGATTTCCGT AATACCATCA TCATCATGAC CTCGAATATC
GGAGCCAAGG ATATCAAGAA CATCGGTGCC GGTACGGGCA TGGGATTTTC TCCGCCGGAT
GATATTGCCG GGACATACAA GAACATGAAA TCCACCATCG AGGATGCTCT CAAGAGGGTG
TTCAACCCCG AGTTCCTGAA CCGTATCGAC GATATCGTGG TTTTCCATCA GCTTGAAAAG
CAGCATATTT TCAAAATCAT CGATATTACG GCCGGAAAGC TGTTCAAGAG GCTTCGCGAG
ATGGGTATCG ATGTCGAGAT CGATGAAAAA GCCAAGGAGT TTCTTGTCGA TAAAGGTTAC
GACCAGAAGT ACGGAGCGCG TCCGCTCAAG AGAGCTCTGC AGAAGTATGT GGAAGATCCT
CTCGCTGAAG AGATGCTCAG GGGACGGTTC ACCGAGGGCA GTCTGATAAG GATAACATTC
GACGAAGTTG AAAAGGAGCT GCATTTTGCC GAAGGCCATG AGAAGGAGCA TACCGGAACG
GTCGAGATAA CGCCTCCGGA AGACAAGTGA
 
Protein sequence
MEGNFSNRVQ DVIRLSREEA LRLGHDYIGT EHLLLGLIRE GEGIAARILR NLKIDLLRLK 
QKIEESTHPK VPATQMGNVP LTKQAEKVLK ITYLEAKICK SNVIGTEHLL LSILKGDDNI
AAQILEQFGV TYDLVKDELI SITTGKSESD EPPMEGSYSS GSAERLPKKG DPKRGERTKT
PVLDNFGRDI TRLALEDKLD PIIGREKEIE RVAQVLSRRK KNNPVLIGEP GVGKTAIAEG
LALKIVQRKV SRVLYDKRVV ALDLAALVAG TKYRGQFEER MKALMNELER SRDVILFIDE
LHTIVGAGGA SGSLDASNIF KPALARGELQ CIGATTLDEY RQYIEKDGAL DRRFQKIMVE
PASVDETIQI LNNIKSKYES HHHVQYSEDA IEKAVKLSER YITDRFLPDK AIDVMDEAGA
RVHLSNIHVP VEILDLEKSI EEIKAEKNQV VKMQNFEEAA TLRDKEKHLL EALDHAKQEW
EERASESVYD VTEEDITSVI AMMTGIPVVK VAQSESRKLL SMEADLMKEV IGQDEAIKKI
TKAIQRTRAG LKDPSRPIGS FIFLGPTGVG KTELAKALTR YIFDSEDALI RADMSEYMEK
FSVSRLVGAP PGYVGYEEGG QLTEKVRRKP YSVVLIDEIE KAHPDVFNIL LQVLDEGVLT
DGLGRKVDFR NTIIIMTSNI GAKDIKNIGA GTGMGFSPPD DIAGTYKNMK STIEDALKRV
FNPEFLNRID DIVVFHQLEK QHIFKIIDIT AGKLFKRLRE MGIDVEIDEK AKEFLVDKGY
DQKYGARPLK RALQKYVEDP LAEEMLRGRF TEGSLIRITF DEVEKELHFA EGHEKEHTGT
VEITPPEDK