| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0242 |
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| Symbol | |
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| ID | 6354698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 271283 |
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| End bp | 273475 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642667870 |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | YP_001942316 |
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| Protein GI | 189345787 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000113999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGCCT TCGCGCTCAA TCCGTTCAAG GGCCTTCCGA GCCTTGAGGA ACTTGAAAAT
CCAAATCCGG AACTCGCTTC GCTTGTCTAT TCCGAAGACG GCATCCTGCT GCACAAGTTT
TTTCTTAAAA ACCGCACGTT CATTCCGCTA AAATCCATCC CGAAATCGGC ACAGCACGCC
CTGATCGCCA CCGAGGACGT CTCGTTCTAC AGTCACTGGG GTATCGATCT CAGAAGACTC
GCTCTGGTGA TGGGTGAAAA TCTGATCAAG GGACGCAAAA GATGGCATGG CGCGAGCACC
ATTACCCAGC AGCTCGCAAA AAACCTCTAT CTGACCCAGG AACGGACGAT CAGCAGAAAA
GCCAAAGAGT TCATCACCGC TATCGAGCTG GAAAAAACCT ATACCAAGGA CGAAATTCTC
GCCCTCTACC TCAATACGGT TTATTTCGGT TCCGGAGCAT ACGGCATCGA GGCGGCATCG
AGAACCTATT TCGGCAAGCC GGCAAGCCAG CTGACGCTTC CGGAAAGCGC GACGCTCATT
GCAACCCTGA AAAACCCTAC CGGATACAAC CCGGTTAAAA ATCCTTCCAG CTCGATCGGC
AGAAGAAATC TTATTCTTTC GCTGATGGAA AAGGAAAAAT TCATTACCCC CGCACAGGCT
GCCGCAGCTA AAAAAACCCG CCTGATCCTG AAATTCACTC CGGTAAACCA TCACGGACTC
GCTCCCTATT TTACCGAGTA TATCCGCCAG ACCATCAAAC CGGCATCGAT GCTGGGCGAC
ATCAACGTTT ACCGAGACGG ACTCAGCATT CAGACGACAC TGGACAGCCG TATGCAGAAA
TATGCCGAGC AGGCTGTCCG GGAACACCTG TCGTCACTGC AGGCGGCATT CGATCGTTCA
TGGAGATGGC CTGAATCGCT TAAAAATCAG ATCATTAAAG AGAGCGCCCG GTTCAAGGAA
CTCCGTGAAG ACGGGCTTAC CGAACAGTCA GCCATGGCGA AACTGAAAGC CGACAGGGTA
TGGCTGAACA ATTTGCTGAA GGAAAAAACA AGGATACAGG TAGGATTTGT CGTCATCGAC
CCATCCAACG GACACGTCAA AGCCTGGGTG GGCGGCAATA ATTTCTCTCC CGACGATTAC
CGATATCAGT TCGACCATGT ATGGCAGGCA AAACGACAGC CCGGCTCGAC CTTCAAGCCG
TTTGTCTATA CTGCGGCCAT CGATAAAGGC ATTCCGGCCA ATTTCAGGGT GCTCAACCAG
CCTGTGGCCC TGAGAAGCGG CAGCGGAATC TGGTCGCCGA GAAACTCCGA CGGCTCTTCC
GGCGGACTGA CTACCCTTCG GTCGGCATTG AGCCGCTCGA TGAACCAGGT TACGGTACGT
CTTGCTTACG AACAGCTCAA AGTGCCGGAA ATCATCAGTT ACGCAAGAAG GATGGGAATC
TCTTCCCCGA TTCCCTCAAA CCTTTCCATT GTGCTCGGCA CCGCGGAAGT TACGCCGCTT
GAACTTGCCG GCGCTTTTGC AACCTATGCC AATAACGGCA TCTGGAACGA ACCGGTCTCG
ATTCTGAAGG TTGAAGACAA GCATAACCGG GTTATTTCTG AATACCGTCC GAACAGTCGC
TTTGCCATCG ACTCCACATC GAACTTTGTC ATGGTTTCCA TGCTCAAGGA TGTCGTCAAC
AAAGGTACCG GTATTGCGCT CAGAGCCCGT TACGGTTTCG ATTACGAAGC TGCAGGAAAA
ACCGGCACAA CCCAGAGCAT GCGTGACGCA TGGTTCGCCG GATTTACCCC CCAGCTCGCC
GCCGTCGTCT GGACAGGATT TGACGATGAA CGGGTCAAGT TCACCTCGAT GGAGTACGGC
CAGGGAGCAA GAGCTGCCCT TCCGATATGG GCGCTGTTCA TGAAAAGCGC TTACAGCGAT
CCAACGCTGA AGCTTGAGAA CCGCTATTTC CACATTCCTG ATAACGTGAT AGCCGTCCCG
ATTGCCGGGA ATACCAATAC GCCGTCGGAC TTGATGGGCA GTGACGTGTA TATTGAATAC
TATACGCCGA AAGGATTTAA TTATTATAAA TCACAGCCGG TACGTTCTTA TCAGTCAACC
ACGGAAGAAT CGGATGATGC TTCCGGCAGC GGAGAATCGG CGGAACCTCA GCCGCCCCCT
TCAGAAGAAT CTGCAGGAGA AGGGATTTTC TGA
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| Protein sequence | MSAFALNPFK GLPSLEELEN PNPELASLVY SEDGILLHKF FLKNRTFIPL KSIPKSAQHA
LIATEDVSFY SHWGIDLRRL ALVMGENLIK GRKRWHGAST ITQQLAKNLY LTQERTISRK
AKEFITAIEL EKTYTKDEIL ALYLNTVYFG SGAYGIEAAS RTYFGKPASQ LTLPESATLI
ATLKNPTGYN PVKNPSSSIG RRNLILSLME KEKFITPAQA AAAKKTRLIL KFTPVNHHGL
APYFTEYIRQ TIKPASMLGD INVYRDGLSI QTTLDSRMQK YAEQAVREHL SSLQAAFDRS
WRWPESLKNQ IIKESARFKE LREDGLTEQS AMAKLKADRV WLNNLLKEKT RIQVGFVVID
PSNGHVKAWV GGNNFSPDDY RYQFDHVWQA KRQPGSTFKP FVYTAAIDKG IPANFRVLNQ
PVALRSGSGI WSPRNSDGSS GGLTTLRSAL SRSMNQVTVR LAYEQLKVPE IISYARRMGI
SSPIPSNLSI VLGTAEVTPL ELAGAFATYA NNGIWNEPVS ILKVEDKHNR VISEYRPNSR
FAIDSTSNFV MVSMLKDVVN KGTGIALRAR YGFDYEAAGK TGTTQSMRDA WFAGFTPQLA
AVVWTGFDDE RVKFTSMEYG QGARAALPIW ALFMKSAYSD PTLKLENRYF HIPDNVIAVP
IAGNTNTPSD LMGSDVYIEY YTPKGFNYYK SQPVRSYQST TEESDDASGS GESAEPQPPP
SEESAGEGIF
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