| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0185 |
|---|
| Symbol | |
|---|
| ID | 6354637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 203359 |
|---|
| End bp | 205434 |
|---|
| Gene Length | 2076 bp |
|---|
| Protein Length | 691 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642667813 |
|---|
| Product | elongation factor G |
|---|
| Protein accession | YP_001942263 |
|---|
| Protein GI | 189345734 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.52749 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCCG TTCAACCCGA ACAACTGCGC AACATTGTCA TCACCGGTCA TACCGGTTCA
GGAAAAACCA TGCTCTCTGA GTCTTTCGCC CTCTCAATGG GCGCGGTAAA CCGACTGGGA
AGCATTGACG ACGGAAACAC TCTCTCCGAC TATTCAGCAG ATGAGATACA GAGAAAGCAC
AGTCTCAATA CCAGCCTGCT GCACGGATTC TGGAAAGACA CGAAAATTAA TATCATCGAC
ACACCCGGCC TGCTCGACTT TCACGGTGAT GTTAAATCAG CAATGCGGGT TGCGGACACC
GTTATCATTA CCGTCAATGC ATCGACAGGT GTGGAAGTCG GTACCGATTC CATATGGGAG
TATACCAGAG AATACTACAA GCCAACGATG TTCGTGCTTA CCAAGCTGGA TGCAGAGCGC
ACAAGCTTCA GCAATACGGT AGAAGAACTC AGAGAGCATT TTGGTCACCT TGTTACGCCG
ATACAGTTTC CTGCCGAAGA GGGTCAGGGA CACCATATCC TGATCGATAT ATTATTGATG
AAACAGCTGG AATTCGACCC GGATAAACCT GGCAGCATGA CTGTTGCAGA CATTCCGGAT
CTCTATCTGA AGCGGGCAGA AGATCTCCAT CAGCAACTGA TCGAAGCTGT CGCAGAAACA
GACGAAGAGC TGATGAACAG GTACTTCGAA ATTGGAACCC TGACTGAAGA GGAATTGCGG
TCGGGCATTA AATCCGCACT GGTAACCAGA ACATTCTTTC CGGTTTTCTG TACCTCCCCG
CTGCATATGA TCGGTACGGA ACGTCTTCTC GATGCGATGG TCAATCTCTG CCCCTCTCCG
ATTGAACGGG GACCGGAACA TTCGCTCTGT ACCGTTGATG AAAACGAACG ACTTCTGGAA
CCAGATCCGG CAGGCCCCAC AGTTGCGTTC ATCTTTAAAA CCATGTCGGA GCCCAGAGTC
GGAGAAGTTT CCTATCTCCG CGTTTATTCG GGTCATATCG AAACCGGGCA TGAACTTATC
GACGTGCAGA CCGGTCAGCT TGAAAAAATC GGTCAGGTTT ACACCATTCT CGGCCAGAAA
AAAATCCCGG TCGACAAGCT CATGGCCGGC GACATCGGCA TGGTTGTCAA ACTCAAGGAC
GCTCACACCA ATGACACCCT TGCCGACAAG GGAACCAGTT GCCGCATAAG CCCGATAACC
TTCCCTGAAC CGGTCTTTGC TTCTGCGATC ATACCCATTG CTCAGGGTGA CGAAGAAAAA
ATATCCGCCG GACTGCATCA TCTGCATGAA GAAGATCCGA GCTTTGCCAT CGTTCATGAA
GTCGAGTTCA ATCAGACCAT CATCAAAACG CTTGGCGAAA CCCATCTCGA TATCATTATC
AGCCGCCTTC AGAACAAGTT CAATGTTCAG GTTGAAACCG CACCGATAAA GATTCCCTAT
CGCGAAACAA TTCGGATGAC GGCAACAGCG CAGGGAAAAT ATAAAAAGCA GTCAGGCGGT
CGGGGACAGT ACGGAGATGT CTGGATAAGA CTTGAACCAT TACCGAAAGA CAGCGGTTTC
GAGTTTTCGA GTGAGGTTGT AGGAGGAGTG GTACCTACCC GATACCTTCC GGCTGTTGAA
AAAGGCATCC GTGAATCCAT TGCATCCGGT GTACTTGCAG GTTATCCGGT TATCGACCTG
AAAGCCGTTG CCTATGATGG CTCGTACCAT CCGGTTGACA GTTCTGAATT CGCTTTCAAG
ATAGCTGCGA GCATGGCATT CAAAACGGCA TTTGAAAAAG CCAAGCCGCT GCTCCTCGAA
CCGTTTTTCT CTCTGACCGT TTATACGCCG GATCAATATA CCGGTGAAAT TGTAGGCGAT
ATTTCAAGCC GTAGAGGAAA AATTCTGGGG ATGGAGACCG ATGCCCGTTT TCAGGTCATC
AAAGCCCTCA TTCCACAGGC TTCACTGGCT ACATTCCACC ACTCGCTGAC TCGACTTACG
CAAAGCAGGG CTAAATACAC GTATGGCTTC AGTCATTACG AAGAGGCTCC GCAGGATGTA
GCCCAGCAGG TTATTGCCGA AAGTAAACAA CAGTAA
|
|---|
| Protein sequence | MQAVQPEQLR NIVITGHTGS GKTMLSESFA LSMGAVNRLG SIDDGNTLSD YSADEIQRKH
SLNTSLLHGF WKDTKINIID TPGLLDFHGD VKSAMRVADT VIITVNASTG VEVGTDSIWE
YTREYYKPTM FVLTKLDAER TSFSNTVEEL REHFGHLVTP IQFPAEEGQG HHILIDILLM
KQLEFDPDKP GSMTVADIPD LYLKRAEDLH QQLIEAVAET DEELMNRYFE IGTLTEEELR
SGIKSALVTR TFFPVFCTSP LHMIGTERLL DAMVNLCPSP IERGPEHSLC TVDENERLLE
PDPAGPTVAF IFKTMSEPRV GEVSYLRVYS GHIETGHELI DVQTGQLEKI GQVYTILGQK
KIPVDKLMAG DIGMVVKLKD AHTNDTLADK GTSCRISPIT FPEPVFASAI IPIAQGDEEK
ISAGLHHLHE EDPSFAIVHE VEFNQTIIKT LGETHLDIII SRLQNKFNVQ VETAPIKIPY
RETIRMTATA QGKYKKQSGG RGQYGDVWIR LEPLPKDSGF EFSSEVVGGV VPTRYLPAVE
KGIRESIASG VLAGYPVIDL KAVAYDGSYH PVDSSEFAFK IAASMAFKTA FEKAKPLLLE
PFFSLTVYTP DQYTGEIVGD ISSRRGKILG METDARFQVI KALIPQASLA TFHHSLTRLT
QSRAKYTYGF SHYEEAPQDV AQQVIAESKQ Q
|
|---|
| |