Gene Clim_0182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0182 
Symbol 
ID6355837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp199470 
End bp201665 
Gene Length2196 bp 
Protein Length731 aa 
Translation table11 
GC content51% 
IMG OID642667810 
Productphotosystem P840 reaction center, large subunit 
Protein accessionYP_001942260 
Protein GI189345731 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.0763e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAC AAGTGAATCC TGCAGGAGTC AAGCCAAAGG GATCTGTCCC ACCTCCCAAG 
GGGAATGCTC CTTCTCCAAA GGGAAACGGC GCACCAGGCG GACCGTCTGT CATCAAGGAA
CAGGACGCTG CCAAAATGAG GAGATTTCTG TTTCAGAGAA CAGAAACGAG AACGACGAAG
TGGTATCAGG TATTTGATAC CGACAAGCTT GACGACGAAC AGGTAGTCGG CGGTCATCTC
GCCCTTCTCG GGGTTATGGG TTTTCTCATG GCCATCTACT ACATCTCCGG AATCCAGGTA
TTTCCGGGGG GTTATGCCGG TTTTCACGAT AACTGGTTCT ATCTTACTAT CAAGCCGAGG
ATGGTATCTC TCGGTATCGA TACGTACAGC ACGAAAACTG CCGATCTTGA GCAGGCTGCC
ATTAACCTTC TCGGCTGGGC TCTTCTTCAC GTCATTTCCG GTTCGATTCT GCTTTTCGGA
GGCTGGAGGC ACTGGACTCA CAACCTGACC AATCCGTTTA CCGGCAGGGC TGGCAACTTC
CGCGACTTCC GTTTTCTCGG AAAGTTCGGT GACATGGCGT TCAACGGTAC AAGCGCAAAG
ACCTACAAGG ATGCGCTCGG ACCTCACACC GTTTACATGT CTCTGCTCTT TCTCGGCTGG
GGTCTTGTGA TGTGGTTTGC TCTCGGCATT CCTCCCGTTC CCGATTTCCA GACAATCAAC
TCAGAGCCTT TCATGTCGTT CGTGTTCGCG GTGCTCTTTT TCGCGCTCGG CATCTACTGG
TGGAACAATC CTCCAAATGC AGCCATTCAC CTCAATGATG ATATGAAGGC CGCGTTTTCC
GTTCACCTGA CAGCTATCGG ATACATCAAC ATTGCTCTCG GCGTCATTGC TTTCGTCGCT
TTCCAGCAGC CCTCTTTCCA TGCGTATTAC AAGGAGCTCG ACAATCTCGT CTTCTACCTG
TACGGTGAAC CGTTCAACCG TGTCAGCTAC GACTTCGTAC AGGAAGGCGG CAGAATCATC
TCCGGAAAGA AAGAGTTCGT TGAATTTGCC CCTTATGCTA TTCTTCCGAA GAACGGCCAG
GCATTCGGTA TGTCGAGAGT GGTCATCAAC CTGATCACCT TCAACCATAT CATCTGCGGC
GTACTCTATG TTTTTGCCGG TGTCTATCAT GGCGGTCAGT ATCTCCTCAA GATTCAGCTG
AACGGTCTGT ACAATCAGAT CAAATCGATC TGGATCACCA AAGGACGCGA TCAGGAAGTT
CAGGTCAAGA TTCTCGGCAC CGTCATGGCG CTCTGTTTTG CAACCATGCT TTCCGTTTAT
GCCGTAATCG TCTGGAACAC CATCTGTGAG CTGAATATTT TCGGCACAAA CATCATGATG
TCGTTCTACT GGCTGAAACC GCTTCCGATT TTCCAGTGGA TGTTCACCGA TCCGAGCATC
AATGACTGGG TTATGGCACA TGTTATCACA GCCGGCTCAC TATTCTCGCT TATCGCACTT
GTGCGTATCG CATTCTTCTC TCATACCTCT CCATTGTGGG ATGATCTCGG ACTGAAGAAG
AACTCGTATT CATTCCCTTG CCTCGGCCCT GTTTACGGTG GTACCTGCGG CGTTTCCATT
CAGGATCAGC TCTGGTTTGC CATGCTTTGG GGAGTAAAGG GTCTTTCTGC AGTCTGCTGG
TACATTGACG GTGCATGGAT CGCTTCGATG ATGTACGGTG TGCCTGTTGC CGATGCGAAG
GCCTGGGATT CGGTTGCCGG TCTTGCTCAT CACTATACTT CGGGCATCTT CTATTATTTC
TGGACAGAGA CCGTAACGAT CTTCTCGAGT TCTCACCTTT CGGTGATTCT CATGATCGGT
CACCTGATCT GGTTCATCAG CTTCGCCGTG TGGTTTGAAG ATCGCGGATC GCGTCTTGAA
GGTGCAGATA TTCAGACCCG TACCATCCGC TGGTTCGGCA AGAAGTTCCT GAACAGAGAC
GTTACGTTCC GTTTCCCTGT GCTGACGATT TCCGATTCAA AGCTGGCCGG TACCTTCCTC
TATTTCGGCG GTACCTTTAT GCTGGTCTTC CTGTTCATCG GTAACGGATT CTATCAGACT
GATTCGCCAC TGCCGCCACC GGTAGCAGAG GCTGCTGTTT CCGGACAGCA GATGCTGACT
CAGGTTGTGG ATTTCCTGAT CAAGCTGGTA GCCTGA
 
Protein sequence
MAEQVNPAGV KPKGSVPPPK GNAPSPKGNG APGGPSVIKE QDAAKMRRFL FQRTETRTTK 
WYQVFDTDKL DDEQVVGGHL ALLGVMGFLM AIYYISGIQV FPGGYAGFHD NWFYLTIKPR
MVSLGIDTYS TKTADLEQAA INLLGWALLH VISGSILLFG GWRHWTHNLT NPFTGRAGNF
RDFRFLGKFG DMAFNGTSAK TYKDALGPHT VYMSLLFLGW GLVMWFALGI PPVPDFQTIN
SEPFMSFVFA VLFFALGIYW WNNPPNAAIH LNDDMKAAFS VHLTAIGYIN IALGVIAFVA
FQQPSFHAYY KELDNLVFYL YGEPFNRVSY DFVQEGGRII SGKKEFVEFA PYAILPKNGQ
AFGMSRVVIN LITFNHIICG VLYVFAGVYH GGQYLLKIQL NGLYNQIKSI WITKGRDQEV
QVKILGTVMA LCFATMLSVY AVIVWNTICE LNIFGTNIMM SFYWLKPLPI FQWMFTDPSI
NDWVMAHVIT AGSLFSLIAL VRIAFFSHTS PLWDDLGLKK NSYSFPCLGP VYGGTCGVSI
QDQLWFAMLW GVKGLSAVCW YIDGAWIASM MYGVPVADAK AWDSVAGLAH HYTSGIFYYF
WTETVTIFSS SHLSVILMIG HLIWFISFAV WFEDRGSRLE GADIQTRTIR WFGKKFLNRD
VTFRFPVLTI SDSKLAGTFL YFGGTFMLVF LFIGNGFYQT DSPLPPPVAE AAVSGQQMLT
QVVDFLIKLV A