Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0180 |
Symbol | |
ID | 6355834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 197234 |
End bp | 198091 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642667808 |
Product | protein of unknown function DUF52 |
Protein accession | YP_001942258 |
Protein GI | 189345729 |
COG category | [R] General function prediction only |
COG ID | [COG1355] Predicted dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.578209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCTG AAATCCGATA CCCTGCCGTC GCTGAGGCAT TCTATCCTGC AGATATCCGG GAACTTGAAT CCCTGATCAC CTCACTGCTC CAACAGGTAA AACCTGAACA CAAAAAGAGA AAAAAGATCA GGGCGATCGT GACACCTCAT TCAGGTTATC TCTACAGCGG ATCAATTGCC GCATGCGCCT ACAAGGCCAT AACCGGCAGC ACCTTCAAAA ACGTATTTCT CATGGGCCAT GCCCATGCCT ATCTTTTTGA AGGTGTTGCA CTCGACTCAC ATAAAGCCTG GCATACGCCT CTCGGCAACG TACCGGTCAA TACCGACATG AACGCCCGCC TTATCGGGCT TGCGCCTGAA CTTGTTCATG AGTTGAATAT TGCCCATCAT TCCGACCATA CCCTTGAGGT TCAGATCCCG TTTCTGCTCC GGACACTCAA GCCGGACTTC TCCATCGTAC CTATGCTTTT CGGTGAAAAC GCTATTGACG TTCACCTCAA AACAGCAGAT TTACTGCTCC CCCTGCTGAA TCCTGACGAC CTGCTCGTTG TCAGCACAGA CCTGTCGCAC TATCCCGCAT ACCGTGATGC CAATACGATA GACCGGTTAA CTCTCGAACA CATCGTGAGC AGCGACATTG ATGGCCTTGA AGAACATGAG AGAAGAACCA TAAACGAGAA CGCTTCTGAC GAAATCAGTC TCTGCTGCAG TCCCGACGCG CTGAAAACGC TTCTGGTCAT AGCAGGGAGG CTTGGCTGGC ATGCAGAAAA ACTATGCTAC AACAACAGCG GCGACACTCC TCATGACGAC AAAATGAACG TTGTCGGTTT CGGAACAGTG ATTTTCTTCG AGTCCTGA
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Protein sequence | MNPEIRYPAV AEAFYPADIR ELESLITSLL QQVKPEHKKR KKIRAIVTPH SGYLYSGSIA ACAYKAITGS TFKNVFLMGH AHAYLFEGVA LDSHKAWHTP LGNVPVNTDM NARLIGLAPE LVHELNIAHH SDHTLEVQIP FLLRTLKPDF SIVPMLFGEN AIDVHLKTAD LLLPLLNPDD LLVVSTDLSH YPAYRDANTI DRLTLEHIVS SDIDGLEEHE RRTINENASD EISLCCSPDA LKTLLVIAGR LGWHAEKLCY NNSGDTPHDD KMNVVGFGTV IFFES
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