Gene Clim_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0149 
SymbolrpsR 
ID6356119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp168178 
End bp168441 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content42% 
IMG OID642667776 
Product30S ribosomal protein S18 
Protein accessionYP_001942227 
Protein GI189345698 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0238] Ribosomal protein S18 
TIGRFAM ID[TIGR00165] ribosomal protein S18 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.4282e-10 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACAAA AACCAACACA TGTACAGGGA AACAAATCGT TAGGAAACGC TTTGGCTTCC 
AAAAAGAAAG TATCAAAAAA TCAGGTCGTA TTTTTTGACT ACCGGGATGA ACGCAAACTG
AAACGCTTTA TCAACGATCA GGGTAAAATC ATTCCCCGCC GCATCACAGG GCTTTCGGCA
AAAGATCAGA ACCTGTTGAC CCATTCCGTG AAATGGGCAA GGTTTCTTGC TGTAATCCCC
TATGTTGCTG ACGAATACAA ATAA
 
Protein sequence
MRQKPTHVQG NKSLGNALAS KKKVSKNQVV FFDYRDERKL KRFINDQGKI IPRRITGLSA 
KDQNLLTHSV KWARFLAVIP YVADEYK