| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0148 |
|---|
| Symbol | |
|---|
| ID | 6356118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 167667 |
|---|
| End bp | 168140 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642667775 |
|---|
| Product | single-strand binding protein |
|---|
| Protein accession | YP_001942226 |
|---|
| Protein GI | 189345697 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0629] Single-stranded DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00000006762 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAT TAAAAATGCC TGAGATCAAC AGCGTAATCA TTGCGGGTAA TCTGACAAAG
GATCCTGTAT TCAGGCAGAC TAATTCAGGT GGAACACCTG TCGTTAATTT TTCAATCGCA
TGCAACAGAC GGTTTCGCGA CAGCAATCAC CAGTGGCAGG AAGATGTATG CTATGTAGGT
ATCGTTGCGT GGAACAAGCT TGCCGAAAGC TGCCGGGATA ACCTGAAGAA AAGTTCTGCA
GTGCTTGTCG ATGGTGAATT GCAGAGCCGC ACATGGAAGG CCCAGGATGG ATCGTCCAGA
ACAGTTGTCG AAATCAAGGC CAGAAGAATC CAGTTCCTCA ACAAGAGGAA GAAGAACGGC
GAAGAGGATA TTGAAGGCTT TATCGAGGAT GATTGTCAGG AAATTCACCA TGAGGACATC
AGCGATGATG ATCCGGGACA CATCTACGAA TATAAATATC TTTCTTCCGA CTGA
|
|---|
| Protein sequence | MAELKMPEIN SVIIAGNLTK DPVFRQTNSG GTPVVNFSIA CNRRFRDSNH QWQEDVCYVG
IVAWNKLAES CRDNLKKSSA VLVDGELQSR TWKAQDGSSR TVVEIKARRI QFLNKRKKNG
EEDIEGFIED DCQEIHHEDI SDDDPGHIYE YKYLSSD
|
|---|
| |